Protein–RNA interactions for Protein: Q8WW12

PCNP, PEST proteolytic signal-containing nuclear protein, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPQ8WW12 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCNPQ8WW12 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCNPQ8WW12 AL359504.2-201ENST00000605506 1601 ntBASIC18.26■□□□□ 0.51
PCNPQ8WW12 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCNPQ8WW12 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCNPQ8WW12 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCNPQ8WW12 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCNPQ8WW12 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNPQ8WW12 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCNPQ8WW12 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCNPQ8WW12 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCNPQ8WW12 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNPQ8WW12 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.25■□□□□ 0.51
PCNPQ8WW12 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.25■□□□□ 0.51
PCNPQ8WW12 AC044849.2-201ENST00000606596 710 ntBASIC18.25■□□□□ 0.51
PCNPQ8WW12 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCNPQ8WW12 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNPQ8WW12 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.25■□□□□ 0.51
PCNPQ8WW12 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNPQ8WW12 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNPQ8WW12 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCNPQ8WW12 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCNPQ8WW12 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCNPQ8WW12 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCNPQ8WW12 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCNPQ8WW12 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCNPQ8WW12 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCNPQ8WW12 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.24■□□□□ 0.51
PCNPQ8WW12 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCNPQ8WW12 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.24■□□□□ 0.51
PCNPQ8WW12 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCNPQ8WW12 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.24■□□□□ 0.51
PCNPQ8WW12 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCNPQ8WW12 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.24■□□□□ 0.51
PCNPQ8WW12 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.24■□□□□ 0.51
PCNPQ8WW12 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCNPQ8WW12 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCNPQ8WW12 AC010542.4-201ENST00000563151 1910 ntBASIC18.23■□□□□ 0.51
PCNPQ8WW12 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCNPQ8WW12 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCNPQ8WW12 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCNPQ8WW12 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCNPQ8WW12 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.23■□□□□ 0.51
PCNPQ8WW12 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCNPQ8WW12 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.23■□□□□ 0.51
PCNPQ8WW12 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCNPQ8WW12 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCNPQ8WW12 AL162393.1-201ENST00000437852 946 ntBASIC18.23■□□□□ 0.51
PCNPQ8WW12 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCNPQ8WW12 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCNPQ8WW12 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCNPQ8WW12 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PCNPQ8WW12 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
PCNPQ8WW12 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
PCNPQ8WW12 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCNPQ8WW12 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PCNPQ8WW12 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCNPQ8WW12 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCNPQ8WW12 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCNPQ8WW12 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCNPQ8WW12 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCNPQ8WW12 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCNPQ8WW12 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCNPQ8WW12 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCNPQ8WW12 LINC01006-201ENST00000333319 2292 ntBASIC18.21■□□□□ 0.51
PCNPQ8WW12 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.21■□□□□ 0.51
PCNPQ8WW12 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCNPQ8WW12 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCNPQ8WW12 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCNPQ8WW12 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.21■□□□□ 0.51
PCNPQ8WW12 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCNPQ8WW12 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCNPQ8WW12 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.21■□□□□ 0.51
PCNPQ8WW12 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCNPQ8WW12 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.21■□□□□ 0.51
PCNPQ8WW12 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCNPQ8WW12 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCNPQ8WW12 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNPQ8WW12 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNPQ8WW12 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.2■□□□□ 0.5
PCNPQ8WW12 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNPQ8WW12 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNPQ8WW12 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.2■□□□□ 0.5
PCNPQ8WW12 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.2■□□□□ 0.5
PCNPQ8WW12 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNPQ8WW12 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
PCNPQ8WW12 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNPQ8WW12 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.2■□□□□ 0.5
PCNPQ8WW12 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PCNPQ8WW12 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
PCNPQ8WW12 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCNPQ8WW12 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCNPQ8WW12 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNPQ8WW12 MIR6090-201ENST00000622481 60 ntBASIC18.19■□□□□ 0.5
PCNPQ8WW12 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNPQ8WW12 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCNPQ8WW12 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNPQ8WW12 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PCNPQ8WW12 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNPQ8WW12 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms