Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ITM2AO43736 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.65■■□□□ 1.06
ITM2AO43736 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.65■■□□□ 1.06
ITM2AO43736 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ITM2AO43736 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.65■■□□□ 1.06
ITM2AO43736 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ITM2AO43736 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ITM2AO43736 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.65■■□□□ 1.06
ITM2AO43736 AC010980.1-201ENST00000587192 1142 ntBASIC21.65■■□□□ 1.06
ITM2AO43736 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
ITM2AO43736 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ITM2AO43736 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ITM2AO43736 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ITM2AO43736 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ITM2AO43736 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ITM2AO43736 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.64■■□□□ 1.05
ITM2AO43736 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ITM2AO43736 AC004987.1-201ENST00000428627 508 ntBASIC21.64■■□□□ 1.05
ITM2AO43736 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.64■■□□□ 1.05
ITM2AO43736 NTF6A-201ENST00000591175 560 ntBASIC21.64■■□□□ 1.05
ITM2AO43736 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.64■■□□□ 1.05
ITM2AO43736 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ITM2AO43736 FAM99A-202ENST00000538190 1989 ntBASIC21.64■■□□□ 1.05
ITM2AO43736 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.64■■□□□ 1.05
ITM2AO43736 AC010542.4-201ENST00000563151 1910 ntBASIC21.64■■□□□ 1.05
ITM2AO43736 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ITM2AO43736 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ITM2AO43736 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ITM2AO43736 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ITM2AO43736 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ITM2AO43736 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
ITM2AO43736 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ITM2AO43736 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.63■■□□□ 1.05
ITM2AO43736 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ITM2AO43736 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ITM2AO43736 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.63■■□□□ 1.05
ITM2AO43736 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
ITM2AO43736 SNX5-217ENST00000606557 1087 ntBASIC21.63■■□□□ 1.05
ITM2AO43736 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.63■■□□□ 1.05
ITM2AO43736 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.63■■□□□ 1.05
ITM2AO43736 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ITM2AO43736 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.63■■□□□ 1.05
ITM2AO43736 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ITM2AO43736 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ITM2AO43736 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ITM2AO43736 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ITM2AO43736 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ITM2AO43736 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ITM2AO43736 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.62■■□□□ 1.05
ITM2AO43736 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ITM2AO43736 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.62■■□□□ 1.05
ITM2AO43736 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
ITM2AO43736 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ITM2AO43736 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ITM2AO43736 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
ITM2AO43736 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
ITM2AO43736 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.61■■□□□ 1.05
ITM2AO43736 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ITM2AO43736 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.61■■□□□ 1.05
ITM2AO43736 ATP5G2P3-201ENST00000429083 425 ntBASIC21.61■■□□□ 1.05
ITM2AO43736 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.61■■□□□ 1.05
ITM2AO43736 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ITM2AO43736 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.61■■□□□ 1.05
ITM2AO43736 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
ITM2AO43736 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ITM2AO43736 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ITM2AO43736 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ITM2AO43736 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ITM2AO43736 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.6■■□□□ 1.05
ITM2AO43736 ABHD17AP5-201ENST00000580133 923 ntBASIC21.6■■□□□ 1.05
ITM2AO43736 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ITM2AO43736 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ITM2AO43736 AC074183.2-201ENST00000623112 922 ntBASIC21.6■■□□□ 1.05
ITM2AO43736 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ITM2AO43736 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ITM2AO43736 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ITM2AO43736 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.6■■□□□ 1.05
ITM2AO43736 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ITM2AO43736 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ITM2AO43736 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.59■■□□□ 1.05
ITM2AO43736 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ITM2AO43736 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ITM2AO43736 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ITM2AO43736 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.59■■□□□ 1.05
ITM2AO43736 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ITM2AO43736 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ITM2AO43736 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ITM2AO43736 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.59■■□□□ 1.05
ITM2AO43736 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
ITM2AO43736 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.59■■□□□ 1.05
ITM2AO43736 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ITM2AO43736 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ITM2AO43736 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ITM2AO43736 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ITM2AO43736 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ITM2AO43736 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ITM2AO43736 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.58■■□□□ 1.05
ITM2AO43736 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.58■■□□□ 1.05
ITM2AO43736 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.58■■□□□ 1.05
ITM2AO43736 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms