Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
PCDHA13Q9Y5I0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA13Q9Y5I0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDHA13Q9Y5I0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA13Q9Y5I0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA13Q9Y5I0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA13Q9Y5I0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA13Q9Y5I0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PCDHA13Q9Y5I0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHA13Q9Y5I0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA13Q9Y5I0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA13Q9Y5I0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PCDHA13Q9Y5I0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHA13Q9Y5I0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHA13Q9Y5I0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA13Q9Y5I0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA13Q9Y5I0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA13Q9Y5I0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA13Q9Y5I0 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHA13Q9Y5I0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHA13Q9Y5I0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.67■■□□□ 1.38
PCDHA13Q9Y5I0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA13Q9Y5I0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA13Q9Y5I0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHA13Q9Y5I0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA13Q9Y5I0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA13Q9Y5I0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA13Q9Y5I0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA13Q9Y5I0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHA13Q9Y5I0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHA13Q9Y5I0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHA13Q9Y5I0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA13Q9Y5I0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA13Q9Y5I0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA13Q9Y5I0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA13Q9Y5I0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA13Q9Y5I0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA13Q9Y5I0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA13Q9Y5I0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA13Q9Y5I0 AC103834.1-201ENST00000520383 144 ntBASIC23.65■■□□□ 1.38
PCDHA13Q9Y5I0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA13Q9Y5I0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA13Q9Y5I0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA13Q9Y5I0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHA13Q9Y5I0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA13Q9Y5I0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA13Q9Y5I0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHA13Q9Y5I0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.64■■□□□ 1.38
PCDHA13Q9Y5I0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA13Q9Y5I0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA13Q9Y5I0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
PCDHA13Q9Y5I0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA13Q9Y5I0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA13Q9Y5I0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA13Q9Y5I0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
PCDHA13Q9Y5I0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA13Q9Y5I0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA13Q9Y5I0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA13Q9Y5I0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
PCDHA13Q9Y5I0 FBXW4P1-201ENST00000426721 2239 ntBASIC23.63■■□□□ 1.37
PCDHA13Q9Y5I0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
PCDHA13Q9Y5I0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHA13Q9Y5I0 AL137060.1-201ENST00000618151 2648 ntBASIC23.63■■□□□ 1.37
PCDHA13Q9Y5I0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA13Q9Y5I0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA13Q9Y5I0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA13Q9Y5I0 LINC01529-204ENST00000636474 1715 ntBASIC23.62■■□□□ 1.37
PCDHA13Q9Y5I0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA13Q9Y5I0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA13Q9Y5I0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA13Q9Y5I0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA13Q9Y5I0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.62■■□□□ 1.37
PCDHA13Q9Y5I0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.62■■□□□ 1.37
PCDHA13Q9Y5I0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHA13Q9Y5I0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHA13Q9Y5I0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.62■■□□□ 1.37
PCDHA13Q9Y5I0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA13Q9Y5I0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA13Q9Y5I0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA13Q9Y5I0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PCDHA13Q9Y5I0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA13Q9Y5I0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.61■■□□□ 1.37
PCDHA13Q9Y5I0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDHA13Q9Y5I0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA13Q9Y5I0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
PCDHA13Q9Y5I0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA13Q9Y5I0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHA13Q9Y5I0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA13Q9Y5I0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHA13Q9Y5I0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHA13Q9Y5I0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA13Q9Y5I0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
PCDHA13Q9Y5I0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA13Q9Y5I0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA13Q9Y5I0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
PCDHA13Q9Y5I0 AC103724.3-201ENST00000564481 992 ntBASIC23.6■■□□□ 1.37
PCDHA13Q9Y5I0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA13Q9Y5I0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA13Q9Y5I0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA13Q9Y5I0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms