Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.04■□□□□ 0.64
CSMD1Q96PZ7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSMD1Q96PZ7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSMD1Q96PZ7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSMD1Q96PZ7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSMD1Q96PZ7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSMD1Q96PZ7 AC083906.2-201ENST00000511578 360 ntBASIC19.04■□□□□ 0.64
CSMD1Q96PZ7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CSMD1Q96PZ7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CSMD1Q96PZ7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.04■□□□□ 0.64
CSMD1Q96PZ7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CSMD1Q96PZ7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.04■□□□□ 0.64
CSMD1Q96PZ7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSMD1Q96PZ7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CSMD1Q96PZ7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CSMD1Q96PZ7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSMD1Q96PZ7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSMD1Q96PZ7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSMD1Q96PZ7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSMD1Q96PZ7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CSMD1Q96PZ7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CSMD1Q96PZ7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSMD1Q96PZ7 KRT18P29-201ENST00000397031 1267 ntBASIC19.02■□□□□ 0.64
CSMD1Q96PZ7 KRT18P11-201ENST00000435214 1283 ntBASIC19.02■□□□□ 0.64
CSMD1Q96PZ7 AC092118.2-201ENST00000613495 667 ntBASIC19.02■□□□□ 0.64
CSMD1Q96PZ7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CSMD1Q96PZ7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSMD1Q96PZ7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.02■□□□□ 0.63
CSMD1Q96PZ7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.02■□□□□ 0.63
CSMD1Q96PZ7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.02■□□□□ 0.63
CSMD1Q96PZ7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.01■□□□□ 0.63
CSMD1Q96PZ7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CSMD1Q96PZ7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSMD1Q96PZ7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSMD1Q96PZ7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.01■□□□□ 0.63
CSMD1Q96PZ7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSMD1Q96PZ7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSMD1Q96PZ7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSMD1Q96PZ7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CSMD1Q96PZ7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.01■□□□□ 0.63
CSMD1Q96PZ7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSMD1Q96PZ7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSMD1Q96PZ7 DUSP5P2-201ENST00000426873 1033 ntBASIC19.01■□□□□ 0.63
CSMD1Q96PZ7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSMD1Q96PZ7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19■□□□□ 0.63
CSMD1Q96PZ7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSMD1Q96PZ7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19■□□□□ 0.63
CSMD1Q96PZ7 KRT19P1-201ENST00000405746 1186 ntBASIC19■□□□□ 0.63
CSMD1Q96PZ7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CSMD1Q96PZ7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19■□□□□ 0.63
CSMD1Q96PZ7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19■□□□□ 0.63
CSMD1Q96PZ7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
CSMD1Q96PZ7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CSMD1Q96PZ7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CSMD1Q96PZ7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSMD1Q96PZ7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSMD1Q96PZ7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSMD1Q96PZ7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSMD1Q96PZ7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSMD1Q96PZ7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CSMD1Q96PZ7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CSMD1Q96PZ7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.98■□□□□ 0.63
CSMD1Q96PZ7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSMD1Q96PZ7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CSMD1Q96PZ7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSMD1Q96PZ7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSMD1Q96PZ7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.98■□□□□ 0.63
CSMD1Q96PZ7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSMD1Q96PZ7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSMD1Q96PZ7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.97■□□□□ 0.63
CSMD1Q96PZ7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSMD1Q96PZ7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.97■□□□□ 0.63
CSMD1Q96PZ7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.97■□□□□ 0.63
CSMD1Q96PZ7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.97■□□□□ 0.63
CSMD1Q96PZ7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSMD1Q96PZ7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSMD1Q96PZ7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSMD1Q96PZ7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CSMD1Q96PZ7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.96■□□□□ 0.63
CSMD1Q96PZ7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.96■□□□□ 0.63
CSMD1Q96PZ7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSMD1Q96PZ7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSMD1Q96PZ7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CSMD1Q96PZ7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.96■□□□□ 0.63
CSMD1Q96PZ7 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.96■□□□□ 0.63
CSMD1Q96PZ7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 ECEL1P3-201ENST00000427961 737 ntBASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms