RNA–Protein interactions for RNA: ENST00000530979.1

CAVIN3-203, Transcript of caveolae associated protein 3, humanhuman

TSL 2 BASIC

Gene CAVIN3, Length 957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-203ENST00000530979 NISCHQ9Y2I1 1504 aa49.85■■■■■ 5.57
CAVIN3-203ENST00000530979 ABCC9O60706 1549 aa45.26■■■■■ 4.84
CAVIN3-203ENST00000530979 CCDC180Q9P1Z9 1646 aa45.01■■■■■ 4.8
CAVIN3-203ENST00000530979 RB1CC1Q8TDY2 1594 aa43.02■■■■■ 4.48
CAVIN3-203ENST00000530979 DNAJC5BQ9UF47 199 aa42.71■■■■■ 4.43
CAVIN3-203ENST00000530979 NACADO15069 1562 aa42.62■■■■■ 4.41
CAVIN3-203ENST00000530979 DCAF8L2P0C7V8 631 aa42.18■■■■■ 4.34
CAVIN3-203ENST00000530979 PABPN1Q86U42 306 aaKnown RBP eCLIP42.02■■■■■ 4.32
CAVIN3-203ENST00000530979 UNC13AQ9UPW8 1703 aa41.98■■■■■ 4.31
CAVIN3-203ENST00000530979 MYO15BQ96JP2 1530 aa41.93■■■■■ 4.3
CAVIN3-203ENST00000530979 BICRAQ9NZM4 1560 aa41.68■■■■■ 4.26
CAVIN3-203ENST00000530979 SHROOM4Q9ULL8 1493 aa41.25■■■■■ 4.19
CAVIN3-203ENST00000530979 ZCCHC6Q5VYS8 1495 aaKnown RBP41.24■■■■■ 4.19
CAVIN3-203ENST00000530979 DCAF1Q9Y4B6 1507 aa41.22■■■■■ 4.19
CAVIN3-203ENST00000530979 CC2D2AQ9P2K1 1620 aa40.9■■■■■ 4.14
CAVIN3-203ENST00000530979 SCRIBQ14160 1630 aa40.89■■■■■ 4.14
CAVIN3-203ENST00000530979 CECR2Q9BXF3 1484 aa40.86■■■■■ 4.13
CAVIN3-203ENST00000530979 EIF4G1Q04637 1599 aaKnown RBP40.74■■■■■ 4.11
CAVIN3-203ENST00000530979 DNAJC5Q9H3Z4 198 aa39.62■■■■□ 3.93
CAVIN3-203ENST00000530979 NCAPD3P42695 1498 aa39.3■■■■□ 3.88
CAVIN3-203ENST00000530979 CUX2O14529 1486 aa39.28■■■■□ 3.88
CAVIN3-203ENST00000530979 ERCC6Q03468 1493 aa39.19■■■■□ 3.86
CAVIN3-203ENST00000530979 ATAD2BQ9ULI0 1458 aa39.11■■■■□ 3.85
CAVIN3-203ENST00000530979 SMARCA2P51531 1590 aa39.05■■■■□ 3.84
CAVIN3-203ENST00000530979 HMGXB3Q12766 1538 aa39.03■■■■□ 3.84
CAVIN3-203ENST00000530979 SMARCA4P51532 1647 aa39■■■■□ 3.83
CAVIN3-203ENST00000530979 BAZ1AQ9NRL2 1556 aaPredicted RBP38.78■■■■□ 3.8
CAVIN3-203ENST00000530979 BAZ1BQ9UIG0 1483 aaKnown RBP38.75■■■■□ 3.79
CAVIN3-203ENST00000530979 NESP48681 1621 aa38.74■■■■□ 3.79
CAVIN3-203ENST00000530979 PEG3Q9GZU2 1588 aa38.65■■■■□ 3.78
CAVIN3-203ENST00000530979 LAMC3Q9Y6N6 1575 aa38.53■■■■□ 3.76
CAVIN3-203ENST00000530979 THOC2Q8NI27 1593 aaKnown RBP38.51■■■■□ 3.76
CAVIN3-203ENST00000530979 MROH2BQ7Z745 1585 aa38.36■■■■□ 3.73
CAVIN3-203ENST00000530979 PDS5BQ9NTI5 1447 aa38.31■■■■□ 3.72
CAVIN3-203ENST00000530979 KIF21AQ7Z4S6 1674 aa38.3■■■■□ 3.72
CAVIN3-203ENST00000530979 CADPSQ9ULU8 1353 aa38.08■■■■□ 3.69
CAVIN3-203ENST00000530979 MRC2Q9UBG0 1479 aa37.99■■■■□ 3.67
CAVIN3-203ENST00000530979 WDR62O43379 1518 aa37.92■■■■□ 3.66
CAVIN3-203ENST00000530979 WIZO95785 1651 aa37.89■■■■□ 3.66
CAVIN3-203ENST00000530979 CEP164Q9UPV0 1460 aa37.77■■■■□ 3.64
CAVIN3-203ENST00000530979 TRIM41Q8WV44 630 aa37.69■■■■□ 3.62
CAVIN3-203ENST00000530979 FANCD2Q9BXW9 1451 aa37.66■■■■□ 3.62
CAVIN3-203ENST00000530979 CFTRP13569 1480 aa37.57■■■■□ 3.6
CAVIN3-203ENST00000530979 TOP2AP11388 1531 aaKnown RBP37.46■■■■□ 3.59
CAVIN3-203ENST00000530979 RSF1Q96T23 1441 aaPredicted RBP37.43■■■■□ 3.58
CAVIN3-203ENST00000530979 OSCARQ8IYS5 282 aa37.36■■■■□ 3.57
CAVIN3-203ENST00000530979 URB2Q14146 1524 aaKnown RBP37.35■■■■□ 3.57
CAVIN3-203ENST00000530979 PRDM2Q13029 1718 aa37.24■■■■□ 3.55
CAVIN3-203ENST00000530979 IFT140Q96RY7 1462 aa37.03■■■■□ 3.52
CAVIN3-203ENST00000530979 CCDC88BA6NC98 1476 aa36.97■■■■□ 3.51
CAVIN3-203ENST00000530979 RIMBP3CA6NJZ7 1639 aa36.92■■■■□ 3.5
CAVIN3-203ENST00000530979 RIMBP3BA6NNM3 1639 aa36.92■■■■□ 3.5
CAVIN3-203ENST00000530979 RIMBP3Q9UFD9 1639 aa36.92■■■■□ 3.5
CAVIN3-203ENST00000530979 ZNF608Q9ULD9 1512 aaPredicted RBP36.92■■■■□ 3.5
CAVIN3-203ENST00000530979 TOPBP1Q92547 1522 aa36.9■■■■□ 3.5
CAVIN3-203ENST00000530979 ABCC8Q09428 1581 aa36.87■■■■□ 3.49
CAVIN3-203ENST00000530979 ARHGEF11O15085 1522 aa36.77■■■■□ 3.48
CAVIN3-203ENST00000530979 EIF4G3O43432 1585 aaKnown RBP36.77■■■■□ 3.48
CAVIN3-203ENST00000530979 DNMBPQ6XZF7 1577 aa36.76■■■■□ 3.48
CAVIN3-203ENST00000530979 TARBP1Q13395 1621 aaKnown RBP36.59■■■■□ 3.45
CAVIN3-203ENST00000530979 CHD1O14646 1710 aa36.56■■■■□ 3.44
CAVIN3-203ENST00000530979 AQRO60306 1485 aaKnown RBP eCLIP36.54■■■■□ 3.44
CAVIN3-203ENST00000530979 POLA1P09884 1462 aaPredicted RBP36.49■■■■□ 3.43
CAVIN3-203ENST00000530979 CYB5RLQ6IPT4 315 aa36.47■■■■□ 3.43
CAVIN3-203ENST00000530979 FBLN2P98095 1184 aa36.4■■■■□ 3.42
CAVIN3-203ENST00000530979 ARAP1Q96P48 1450 aa36.36■■■■□ 3.41
CAVIN3-203ENST00000530979 SOGA1O94964 1423 aa36.32■■■■□ 3.4
CAVIN3-203ENST00000530979 RAD54L2Q9Y4B4 1467 aa36.31■■■■□ 3.4
CAVIN3-203ENST00000530979 WDR97A6NE52 1622 aa36.31■■■■□ 3.4
CAVIN3-203ENST00000530979 TDRD9Q8NDG6 1382 aaKnown RBP36.26■■■■□ 3.39
CAVIN3-203ENST00000530979 TRHP20396 242 aaPredicted RBP36.23■■■■□ 3.39
CAVIN3-203ENST00000530979 SNAPC4Q5SXM2 1469 aa36.2■■■■□ 3.39
CAVIN3-203ENST00000530979 FGD5Q6ZNL6 1462 aa36.2■■■■□ 3.39
CAVIN3-203ENST00000530979 MAGI1Q96QZ7 1491 aaPredicted RBP36.15■■■■□ 3.38
CAVIN3-203ENST00000530979 CLASP1Q7Z460 1538 aa36.14■■■■□ 3.38
CAVIN3-203ENST00000530979 SYNJ1O43426 1573 aa36.13■■■■□ 3.37
CAVIN3-203ENST00000530979 CHMP7Q8WUX9 453 aaPredicted RBP36.1■■■■□ 3.37
CAVIN3-203ENST00000530979 CUX1P39880 1505 aa36.08■■■■□ 3.37
CAVIN3-203ENST00000530979 GRIN2BQ13224 1484 aa36.08■■■■□ 3.37
CAVIN3-203ENST00000530979 SYNJ2O15056 1496 aa36.01■■■■□ 3.36
CAVIN3-203ENST00000530979 PBRM1Q86U86 1689 aa35.91■■■■□ 3.34
CAVIN3-203ENST00000530979 GAPVD1Q14C86 1478 aa35.88■■■■□ 3.33
CAVIN3-203ENST00000530979 ABCA10Q8WWZ4 1543 aa35.79■■■■□ 3.32
CAVIN3-203ENST00000530979 ABCA5Q8WWZ7 1642 aa35.78■■■■□ 3.32
CAVIN3-203ENST00000530979 GRIN2AQ12879 1464 aa35.6■■■■□ 3.29
CAVIN3-203ENST00000530979 WRNQ14191 1432 aaPredicted RBP eCLIP35.59■■■■□ 3.29
CAVIN3-203ENST00000530979 ADAMTS12P58397 1594 aa35.55■■■■□ 3.28
CAVIN3-203ENST00000530979 AEBP2Q6ZN18 517 aaPredicted RBP35.51■■■■□ 3.28
CAVIN3-203ENST00000530979 NUP160Q12769 1436 aa35.49■■■■□ 3.27
CAVIN3-203ENST00000530979 CEP170Q5SW79 1584 aa35.47■■■■□ 3.27
CAVIN3-203ENST00000530979 ERCC6L2Q5T890 1561 aa35.47■■■■□ 3.27
CAVIN3-203ENST00000530979 BIVM-ERCC5R4GMW8 1640 aa35.46■■■■□ 3.27
CAVIN3-203ENST00000530979 TOP2BQ02880 1626 aa35.45■■■■□ 3.27
CAVIN3-203ENST00000530979 SUPT5HO00267 1087 aaKnown RBP35.43■■■■□ 3.26
CAVIN3-203ENST00000530979 FHAD1B1AJZ9 1412 aa35.42■■■■□ 3.26
CAVIN3-203ENST00000530979 SHROOM2Q13796 1616 aa35.4■■■■□ 3.26
CAVIN3-203ENST00000530979 ERICH3Q5RHP9 1530 aa35.37■■■■□ 3.25
CAVIN3-203ENST00000530979 PRG4Q92954 1404 aaPredicted RBP35.17■■■■□ 3.22
CAVIN3-203ENST00000530979 KIF13AQ9H1H9 1805 aa35.12■■■■□ 3.21
CAVIN3-203ENST00000530979 JPH4Q96JJ6 628 aa35.09■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms