Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01006Q8NI28 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.4■□□□□ 0.38
LINC01006Q8NI28 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01006Q8NI28 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC01006Q8NI28 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC01006Q8NI28 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.4■□□□□ 0.38
LINC01006Q8NI28 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.4■□□□□ 0.38
LINC01006Q8NI28 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01006Q8NI28 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.39■□□□□ 0.37
LINC01006Q8NI28 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.39■□□□□ 0.37
LINC01006Q8NI28 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.39■□□□□ 0.37
LINC01006Q8NI28 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.39■□□□□ 0.37
LINC01006Q8NI28 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC01006Q8NI28 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC01006Q8NI28 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
LINC01006Q8NI28 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01006Q8NI28 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01006Q8NI28 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC01006Q8NI28 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01006Q8NI28 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01006Q8NI28 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01006Q8NI28 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01006Q8NI28 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01006Q8NI28 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01006Q8NI28 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01006Q8NI28 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01006Q8NI28 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.38■□□□□ 0.37
LINC01006Q8NI28 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01006Q8NI28 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01006Q8NI28 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01006Q8NI28 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC01006Q8NI28 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01006Q8NI28 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
LINC01006Q8NI28 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01006Q8NI28 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01006Q8NI28 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01006Q8NI28 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01006Q8NI28 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01006Q8NI28 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01006Q8NI28 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01006Q8NI28 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.37■□□□□ 0.37
LINC01006Q8NI28 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LINC01006Q8NI28 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC01006Q8NI28 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.37■□□□□ 0.37
LINC01006Q8NI28 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.37■□□□□ 0.37
LINC01006Q8NI28 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01006Q8NI28 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LINC01006Q8NI28 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LINC01006Q8NI28 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01006Q8NI28 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01006Q8NI28 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01006Q8NI28 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LINC01006Q8NI28 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01006Q8NI28 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LINC01006Q8NI28 ID1-201ENST00000376105 1233 ntBASIC17.36■□□□□ 0.37
LINC01006Q8NI28 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01006Q8NI28 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.36■□□□□ 0.37
LINC01006Q8NI28 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01006Q8NI28 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01006Q8NI28 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01006Q8NI28 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01006Q8NI28 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01006Q8NI28 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01006Q8NI28 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01006Q8NI28 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01006Q8NI28 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01006Q8NI28 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.35■□□□□ 0.37
LINC01006Q8NI28 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.35■□□□□ 0.37
LINC01006Q8NI28 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.35■□□□□ 0.37
LINC01006Q8NI28 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01006Q8NI28 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01006Q8NI28 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.35■□□□□ 0.37
LINC01006Q8NI28 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.35■□□□□ 0.37
LINC01006Q8NI28 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LINC01006Q8NI28 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01006Q8NI28 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01006Q8NI28 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01006Q8NI28 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
LINC01006Q8NI28 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01006Q8NI28 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01006Q8NI28 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.34■□□□□ 0.37
LINC01006Q8NI28 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.34■□□□□ 0.37
LINC01006Q8NI28 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.34■□□□□ 0.37
LINC01006Q8NI28 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01006Q8NI28 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC01006Q8NI28 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LINC01006Q8NI28 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC01006Q8NI28 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC01006Q8NI28 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01006Q8NI28 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LINC01006Q8NI28 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.33■□□□□ 0.36
LINC01006Q8NI28 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.33■□□□□ 0.36
LINC01006Q8NI28 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.33■□□□□ 0.36
LINC01006Q8NI28 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LINC01006Q8NI28 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LINC01006Q8NI28 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01006Q8NI28 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01006Q8NI28 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01006Q8NI28 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
LINC01006Q8NI28 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms