Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM56-RWDD3S4R434 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM56-RWDD3S4R434 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM56-RWDD3S4R434 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEM56-RWDD3S4R434 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56-RWDD3S4R434 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56-RWDD3S4R434 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TMEM56-RWDD3S4R434 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM56-RWDD3S4R434 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56-RWDD3S4R434 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56-RWDD3S4R434 AC019171.1-201ENST00000601251 1056 ntBASIC18.16■□□□□ 0.5
TMEM56-RWDD3S4R434 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM56-RWDD3S4R434 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56-RWDD3S4R434 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TMEM56-RWDD3S4R434 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56-RWDD3S4R434 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56-RWDD3S4R434 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56-RWDD3S4R434 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56-RWDD3S4R434 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TMEM56-RWDD3S4R434 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM56-RWDD3S4R434 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM56-RWDD3S4R434 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM56-RWDD3S4R434 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM56-RWDD3S4R434 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM56-RWDD3S4R434 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM56-RWDD3S4R434 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.15■□□□□ 0.5
TMEM56-RWDD3S4R434 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.15■□□□□ 0.5
TMEM56-RWDD3S4R434 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.15■□□□□ 0.5
TMEM56-RWDD3S4R434 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TMEM56-RWDD3S4R434 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM56-RWDD3S4R434 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM56-RWDD3S4R434 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
TMEM56-RWDD3S4R434 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TMEM56-RWDD3S4R434 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.14■□□□□ 0.49
TMEM56-RWDD3S4R434 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.14■□□□□ 0.49
TMEM56-RWDD3S4R434 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM56-RWDD3S4R434 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.14■□□□□ 0.49
TMEM56-RWDD3S4R434 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TMEM56-RWDD3S4R434 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TMEM56-RWDD3S4R434 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM56-RWDD3S4R434 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
TMEM56-RWDD3S4R434 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM56-RWDD3S4R434 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM56-RWDD3S4R434 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM56-RWDD3S4R434 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM56-RWDD3S4R434 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM56-RWDD3S4R434 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM56-RWDD3S4R434 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM56-RWDD3S4R434 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM56-RWDD3S4R434 AC004448.1-201ENST00000458332 883 ntBASIC18.13■□□□□ 0.49
TMEM56-RWDD3S4R434 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TMEM56-RWDD3S4R434 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM56-RWDD3S4R434 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM56-RWDD3S4R434 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM56-RWDD3S4R434 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TMEM56-RWDD3S4R434 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TMEM56-RWDD3S4R434 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM56-RWDD3S4R434 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM56-RWDD3S4R434 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
TMEM56-RWDD3S4R434 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM56-RWDD3S4R434 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.12■□□□□ 0.49
TMEM56-RWDD3S4R434 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM56-RWDD3S4R434 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM56-RWDD3S4R434 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM56-RWDD3S4R434 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM56-RWDD3S4R434 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM56-RWDD3S4R434 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM56-RWDD3S4R434 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM56-RWDD3S4R434 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEM56-RWDD3S4R434 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TMEM56-RWDD3S4R434 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM56-RWDD3S4R434 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEM56-RWDD3S4R434 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.11■□□□□ 0.49
TMEM56-RWDD3S4R434 AF131216.4-201ENST00000638924 1588 ntBASIC18.11■□□□□ 0.49
TMEM56-RWDD3S4R434 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
TMEM56-RWDD3S4R434 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM56-RWDD3S4R434 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.11■□□□□ 0.49
TMEM56-RWDD3S4R434 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TMEM56-RWDD3S4R434 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TMEM56-RWDD3S4R434 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM56-RWDD3S4R434 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM56-RWDD3S4R434 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM56-RWDD3S4R434 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms