Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
PCDHAC2Q9Y5I4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.77■■□□□ 1.88
PCDHAC2Q9Y5I4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHAC2Q9Y5I4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHAC2Q9Y5I4 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.77■■□□□ 1.88
PCDHAC2Q9Y5I4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHAC2Q9Y5I4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.88
PCDHAC2Q9Y5I4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.76■■□□□ 1.87
PCDHAC2Q9Y5I4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.76■■□□□ 1.87
PCDHAC2Q9Y5I4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.76■■□□□ 1.87
PCDHAC2Q9Y5I4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.76■■□□□ 1.87
PCDHAC2Q9Y5I4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.76■■□□□ 1.87
PCDHAC2Q9Y5I4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC26.76■■□□□ 1.87
PCDHAC2Q9Y5I4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHAC2Q9Y5I4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.76■■□□□ 1.87
PCDHAC2Q9Y5I4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHAC2Q9Y5I4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.75■■□□□ 1.87
PCDHAC2Q9Y5I4 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.75■■□□□ 1.87
PCDHAC2Q9Y5I4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHAC2Q9Y5I4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
PCDHAC2Q9Y5I4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.75■■□□□ 1.87
PCDHAC2Q9Y5I4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHAC2Q9Y5I4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.74■■□□□ 1.87
PCDHAC2Q9Y5I4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.74■■□□□ 1.87
PCDHAC2Q9Y5I4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHAC2Q9Y5I4 FP325331.1-202ENST00000623531 1380 ntBASIC26.74■■□□□ 1.87
PCDHAC2Q9Y5I4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHAC2Q9Y5I4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHAC2Q9Y5I4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHAC2Q9Y5I4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHAC2Q9Y5I4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHAC2Q9Y5I4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
PCDHAC2Q9Y5I4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.74■■□□□ 1.87
PCDHAC2Q9Y5I4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHAC2Q9Y5I4 AC144652.1-201ENST00000609974 1624 ntBASIC26.73■■□□□ 1.87
PCDHAC2Q9Y5I4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHAC2Q9Y5I4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHAC2Q9Y5I4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.73■■□□□ 1.87
PCDHAC2Q9Y5I4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC26.73■■□□□ 1.87
PCDHAC2Q9Y5I4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.73■■□□□ 1.87
PCDHAC2Q9Y5I4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHAC2Q9Y5I4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.73■■□□□ 1.87
PCDHAC2Q9Y5I4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHAC2Q9Y5I4 LINC02228-203ENST00000641970 1355 ntBASIC26.72■■□□□ 1.87
PCDHAC2Q9Y5I4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHAC2Q9Y5I4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHAC2Q9Y5I4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHAC2Q9Y5I4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
PCDHAC2Q9Y5I4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHAC2Q9Y5I4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHAC2Q9Y5I4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.71■■□□□ 1.87
PCDHAC2Q9Y5I4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHAC2Q9Y5I4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.71■■□□□ 1.87
PCDHAC2Q9Y5I4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
PCDHAC2Q9Y5I4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
PCDHAC2Q9Y5I4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
PCDHAC2Q9Y5I4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
PCDHAC2Q9Y5I4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHAC2Q9Y5I4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHAC2Q9Y5I4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC26.71■■□□□ 1.87
PCDHAC2Q9Y5I4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
PCDHAC2Q9Y5I4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.71■■□□□ 1.87
PCDHAC2Q9Y5I4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.71■■□□□ 1.87
PCDHAC2Q9Y5I4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
PCDHAC2Q9Y5I4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
PCDHAC2Q9Y5I4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
PCDHAC2Q9Y5I4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
PCDHAC2Q9Y5I4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
PCDHAC2Q9Y5I4 AC142381.3-201ENST00000568208 1670 ntBASIC26.7■■□□□ 1.87
PCDHAC2Q9Y5I4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.87
PCDHAC2Q9Y5I4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHAC2Q9Y5I4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHAC2Q9Y5I4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHAC2Q9Y5I4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHAC2Q9Y5I4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHAC2Q9Y5I4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHAC2Q9Y5I4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHAC2Q9Y5I4 LINC01529-204ENST00000636474 1715 ntBASIC26.7■■□□□ 1.86
PCDHAC2Q9Y5I4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHAC2Q9Y5I4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHAC2Q9Y5I4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHAC2Q9Y5I4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHAC2Q9Y5I4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.69■■□□□ 1.86
PCDHAC2Q9Y5I4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.69■■□□□ 1.86
PCDHAC2Q9Y5I4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHAC2Q9Y5I4 AC105233.4-201ENST00000642045 216 ntBASIC26.69■■□□□ 1.86
PCDHAC2Q9Y5I4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHAC2Q9Y5I4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHAC2Q9Y5I4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHAC2Q9Y5I4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.69■■□□□ 1.86
PCDHAC2Q9Y5I4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHAC2Q9Y5I4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHAC2Q9Y5I4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHAC2Q9Y5I4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.68■■□□□ 1.86
PCDHAC2Q9Y5I4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHAC2Q9Y5I4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.68■■□□□ 1.86
PCDHAC2Q9Y5I4 AP005435.1-201ENST00000529293 1178 ntBASIC26.68■■□□□ 1.86
PCDHAC2Q9Y5I4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
PCDHAC2Q9Y5I4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
PCDHAC2Q9Y5I4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms