Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 ITM2C-210ENST00000620962 501 ntBASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.1■□□□□ 0.65
CSMD1Q96PZ7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSMD1Q96PZ7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSMD1Q96PZ7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.1■□□□□ 0.65
CSMD1Q96PZ7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CSMD1Q96PZ7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSMD1Q96PZ7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSMD1Q96PZ7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.1■□□□□ 0.65
CSMD1Q96PZ7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.1■□□□□ 0.65
CSMD1Q96PZ7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.1■□□□□ 0.65
CSMD1Q96PZ7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSMD1Q96PZ7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSMD1Q96PZ7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSMD1Q96PZ7 FAM201B-201ENST00000458407 597 ntBASIC19.09■□□□□ 0.65
CSMD1Q96PZ7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSMD1Q96PZ7 AC009086.3-201ENST00000623486 1008 ntBASIC19.09■□□□□ 0.65
CSMD1Q96PZ7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSMD1Q96PZ7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.09■□□□□ 0.65
CSMD1Q96PZ7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.09■□□□□ 0.65
CSMD1Q96PZ7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CSMD1Q96PZ7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSMD1Q96PZ7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSMD1Q96PZ7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSMD1Q96PZ7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSMD1Q96PZ7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSMD1Q96PZ7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CSMD1Q96PZ7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CSMD1Q96PZ7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSMD1Q96PZ7 SMUG1P1-201ENST00000590640 811 ntBASIC19.08■□□□□ 0.65
CSMD1Q96PZ7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
CSMD1Q96PZ7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.08■□□□□ 0.65
CSMD1Q96PZ7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.08■□□□□ 0.65
CSMD1Q96PZ7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CSMD1Q96PZ7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CSMD1Q96PZ7 AC097639.1-201ENST00000565519 1891 ntBASIC19.08■□□□□ 0.64
CSMD1Q96PZ7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.08■□□□□ 0.64
CSMD1Q96PZ7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 AC133637.1-201ENST00000624115 1537 ntBASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 POU5F1P3-201ENST00000428824 1078 ntBASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.07■□□□□ 0.64
CSMD1Q96PZ7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 TSPY6P-201ENST00000448518 926 ntBASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 MFSD11-216ENST00000590393 1141 ntBASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSMD1Q96PZ7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSMD1Q96PZ7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSMD1Q96PZ7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSMD1Q96PZ7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.05■□□□□ 0.64
CSMD1Q96PZ7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.05■□□□□ 0.64
CSMD1Q96PZ7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CSMD1Q96PZ7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSMD1Q96PZ7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSMD1Q96PZ7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.05■□□□□ 0.64
CSMD1Q96PZ7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSMD1Q96PZ7 GCSHP5-201ENST00000443090 522 ntBASIC19.05■□□□□ 0.64
CSMD1Q96PZ7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CSMD1Q96PZ7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSMD1Q96PZ7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSMD1Q96PZ7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms