Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
NCK1P16333 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NCK1P16333 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NCK1P16333 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.99■□□□□ 0.95
NCK1P16333 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.99■□□□□ 0.95
NCK1P16333 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCK1P16333 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NCK1P16333 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCK1P16333 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.98■□□□□ 0.95
NCK1P16333 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NCK1P16333 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCK1P16333 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCK1P16333 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NCK1P16333 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.98■□□□□ 0.95
NCK1P16333 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.98■□□□□ 0.95
NCK1P16333 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.98■□□□□ 0.95
NCK1P16333 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCK1P16333 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCK1P16333 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCK1P16333 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCK1P16333 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCK1P16333 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.97■□□□□ 0.95
NCK1P16333 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.97■□□□□ 0.95
NCK1P16333 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCK1P16333 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCK1P16333 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCK1P16333 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.97■□□□□ 0.95
NCK1P16333 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCK1P16333 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.97■□□□□ 0.95
NCK1P16333 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCK1P16333 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
NCK1P16333 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCK1P16333 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCK1P16333 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCK1P16333 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NCK1P16333 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCK1P16333 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCK1P16333 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCK1P16333 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCK1P16333 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCK1P16333 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.96■□□□□ 0.95
NCK1P16333 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NCK1P16333 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCK1P16333 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.95■□□□□ 0.94
NCK1P16333 AC129492.7-201ENST00000622992 756 ntBASIC20.95■□□□□ 0.94
NCK1P16333 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCK1P16333 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCK1P16333 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCK1P16333 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.95■□□□□ 0.94
NCK1P16333 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NCK1P16333 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCK1P16333 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NCK1P16333 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NCK1P16333 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.94■□□□□ 0.94
NCK1P16333 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCK1P16333 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NCK1P16333 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NCK1P16333 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.94■□□□□ 0.94
NCK1P16333 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCK1P16333 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.94■□□□□ 0.94
NCK1P16333 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.94■□□□□ 0.94
NCK1P16333 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCK1P16333 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.93■□□□□ 0.94
NCK1P16333 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCK1P16333 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCK1P16333 U85056.1-201ENST00000616429 682 ntBASIC20.93■□□□□ 0.94
NCK1P16333 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCK1P16333 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NCK1P16333 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
NCK1P16333 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NCK1P16333 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCK1P16333 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.92■□□□□ 0.94
NCK1P16333 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCK1P16333 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCK1P16333 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCK1P16333 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCK1P16333 AC087742.1-201ENST00000575880 1738 ntBASIC20.92■□□□□ 0.94
NCK1P16333 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCK1P16333 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCK1P16333 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.92■□□□□ 0.94
NCK1P16333 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NCK1P16333 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCK1P16333 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NCK1P16333 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NCK1P16333 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NCK1P16333 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NCK1P16333 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.91■□□□□ 0.94
NCK1P16333 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.91■□□□□ 0.94
NCK1P16333 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NCK1P16333 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NCK1P16333 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.9■□□□□ 0.94
NCK1P16333 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
NCK1P16333 AF131216.4-201ENST00000638924 1588 ntBASIC20.9■□□□□ 0.94
NCK1P16333 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCK1P16333 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.9■□□□□ 0.94
NCK1P16333 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCK1P16333 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCK1P16333 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.9■□□□□ 0.94
NCK1P16333 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.9■□□□□ 0.94
NCK1P16333 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms