Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-5A0A0J9YX44 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.35■□□□□ 0.69
TRBV5-5A0A0J9YX44 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRBV5-5A0A0J9YX44 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-5A0A0J9YX44 DUX4L18-201ENST00000553347 1267 ntBASIC19.35■□□□□ 0.69
TRBV5-5A0A0J9YX44 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.35■□□□□ 0.69
TRBV5-5A0A0J9YX44 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-5A0A0J9YX44 AC144652.1-201ENST00000609974 1624 ntBASIC19.35■□□□□ 0.69
TRBV5-5A0A0J9YX44 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-5A0A0J9YX44 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.35■□□□□ 0.69
TRBV5-5A0A0J9YX44 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-5A0A0J9YX44 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-5A0A0J9YX44 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-5A0A0J9YX44 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.34■□□□□ 0.69
TRBV5-5A0A0J9YX44 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.34■□□□□ 0.69
TRBV5-5A0A0J9YX44 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-5A0A0J9YX44 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRBV5-5A0A0J9YX44 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-5A0A0J9YX44 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-5A0A0J9YX44 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV5-5A0A0J9YX44 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV5-5A0A0J9YX44 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV5-5A0A0J9YX44 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TRBV5-5A0A0J9YX44 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV5-5A0A0J9YX44 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV5-5A0A0J9YX44 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TRBV5-5A0A0J9YX44 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.32■□□□□ 0.68
TRBV5-5A0A0J9YX44 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-5A0A0J9YX44 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRBV5-5A0A0J9YX44 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TRBV5-5A0A0J9YX44 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-5A0A0J9YX44 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TRBV5-5A0A0J9YX44 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-5A0A0J9YX44 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-5A0A0J9YX44 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.31■□□□□ 0.68
TRBV5-5A0A0J9YX44 HSD17B1P1-201ENST00000590052 955 ntBASIC19.31■□□□□ 0.68
TRBV5-5A0A0J9YX44 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRBV5-5A0A0J9YX44 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.31■□□□□ 0.68
TRBV5-5A0A0J9YX44 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-5A0A0J9YX44 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-5A0A0J9YX44 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-5A0A0J9YX44 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.3■□□□□ 0.68
TRBV5-5A0A0J9YX44 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-5A0A0J9YX44 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-5A0A0J9YX44 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-5A0A0J9YX44 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRBV5-5A0A0J9YX44 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-5A0A0J9YX44 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-5A0A0J9YX44 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV5-5A0A0J9YX44 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV5-5A0A0J9YX44 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV5-5A0A0J9YX44 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.29■□□□□ 0.68
TRBV5-5A0A0J9YX44 PVT1_1.1-201ENST00000615125 194 ntBASIC19.29■□□□□ 0.68
TRBV5-5A0A0J9YX44 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV5-5A0A0J9YX44 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.29■□□□□ 0.68
TRBV5-5A0A0J9YX44 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRBV5-5A0A0J9YX44 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TRBV5-5A0A0J9YX44 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.29■□□□□ 0.68
TRBV5-5A0A0J9YX44 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV5-5A0A0J9YX44 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV5-5A0A0J9YX44 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 AL137060.1-201ENST00000618151 2648 ntBASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 FBXW4P1-201ENST00000426721 2239 ntBASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 AC074183.2-201ENST00000623112 922 ntBASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
TRBV5-5A0A0J9YX44 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV5-5A0A0J9YX44 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRBV5-5A0A0J9YX44 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRBV5-5A0A0J9YX44 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.27■□□□□ 0.68
TRBV5-5A0A0J9YX44 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms