Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.85■■□□□ 1.09
CSNK1G3Q9Y6M4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSNK1G3Q9Y6M4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.85■■□□□ 1.09
CSNK1G3Q9Y6M4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.85■■□□□ 1.09
CSNK1G3Q9Y6M4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CSNK1G3Q9Y6M4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSNK1G3Q9Y6M4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.85■■□□□ 1.09
CSNK1G3Q9Y6M4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CSNK1G3Q9Y6M4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CSNK1G3Q9Y6M4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.85■■□□□ 1.09
CSNK1G3Q9Y6M4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CSNK1G3Q9Y6M4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.84■■□□□ 1.09
CSNK1G3Q9Y6M4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.84■■□□□ 1.09
CSNK1G3Q9Y6M4 OR2I1P-207ENST00000453522 948 ntBASIC21.84■■□□□ 1.09
CSNK1G3Q9Y6M4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSNK1G3Q9Y6M4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.84■■□□□ 1.09
CSNK1G3Q9Y6M4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.84■■□□□ 1.09
CSNK1G3Q9Y6M4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CSNK1G3Q9Y6M4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.84■■□□□ 1.09
CSNK1G3Q9Y6M4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.84■■□□□ 1.09
CSNK1G3Q9Y6M4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSNK1G3Q9Y6M4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CSNK1G3Q9Y6M4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CSNK1G3Q9Y6M4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSNK1G3Q9Y6M4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSNK1G3Q9Y6M4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CSNK1G3Q9Y6M4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CSNK1G3Q9Y6M4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1G3Q9Y6M4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1G3Q9Y6M4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1G3Q9Y6M4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CSNK1G3Q9Y6M4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CSNK1G3Q9Y6M4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1G3Q9Y6M4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1G3Q9Y6M4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.83■■□□□ 1.09
CSNK1G3Q9Y6M4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1G3Q9Y6M4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.83■■□□□ 1.09
CSNK1G3Q9Y6M4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CSNK1G3Q9Y6M4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CSNK1G3Q9Y6M4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
CSNK1G3Q9Y6M4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G3Q9Y6M4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G3Q9Y6M4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.82■■□□□ 1.08
CSNK1G3Q9Y6M4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.82■■□□□ 1.08
CSNK1G3Q9Y6M4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G3Q9Y6M4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G3Q9Y6M4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G3Q9Y6M4 AC027612.3-201ENST00000413684 1047 ntBASIC21.82■■□□□ 1.08
CSNK1G3Q9Y6M4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.82■■□□□ 1.08
CSNK1G3Q9Y6M4 AC123595.1-201ENST00000440769 1046 ntBASIC21.82■■□□□ 1.08
CSNK1G3Q9Y6M4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G3Q9Y6M4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
CSNK1G3Q9Y6M4 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.82■■□□□ 1.08
CSNK1G3Q9Y6M4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G3Q9Y6M4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G3Q9Y6M4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G3Q9Y6M4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1G3Q9Y6M4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1G3Q9Y6M4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1G3Q9Y6M4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CSNK1G3Q9Y6M4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1G3Q9Y6M4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.81■■□□□ 1.08
CSNK1G3Q9Y6M4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.81■■□□□ 1.08
CSNK1G3Q9Y6M4 AL354811.1-201ENST00000610286 706 ntBASIC21.81■■□□□ 1.08
CSNK1G3Q9Y6M4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.81■■□□□ 1.08
CSNK1G3Q9Y6M4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1G3Q9Y6M4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.81■■□□□ 1.08
CSNK1G3Q9Y6M4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1G3Q9Y6M4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1G3Q9Y6M4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 AC144652.1-201ENST00000609974 1624 ntBASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 LINC01529-204ENST00000636474 1715 ntBASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 AC138932.3-201ENST00000567634 1902 ntBASIC21.8■■□□□ 1.08
CSNK1G3Q9Y6M4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CSNK1G3Q9Y6M4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.79■■□□□ 1.08
CSNK1G3Q9Y6M4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1G3Q9Y6M4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1G3Q9Y6M4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CSNK1G3Q9Y6M4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.79■■□□□ 1.08
CSNK1G3Q9Y6M4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1G3Q9Y6M4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.79■■□□□ 1.08
CSNK1G3Q9Y6M4 AP005435.1-201ENST00000529293 1178 ntBASIC21.79■■□□□ 1.08
CSNK1G3Q9Y6M4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CSNK1G3Q9Y6M4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.79■■□□□ 1.08
CSNK1G3Q9Y6M4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1G3Q9Y6M4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1G3Q9Y6M4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms