Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC27.37■■□□□ 1.97
LEMD3Q9Y2U8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
LEMD3Q9Y2U8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
LEMD3Q9Y2U8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC27.37■■□□□ 1.97
LEMD3Q9Y2U8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC27.37■■□□□ 1.97
LEMD3Q9Y2U8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
LEMD3Q9Y2U8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
LEMD3Q9Y2U8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC27.36■■□□□ 1.97
LEMD3Q9Y2U8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
LEMD3Q9Y2U8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
LEMD3Q9Y2U8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC27.36■■□□□ 1.97
LEMD3Q9Y2U8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC27.36■■□□□ 1.97
LEMD3Q9Y2U8 AP005435.1-201ENST00000529293 1178 ntBASIC27.36■■□□□ 1.97
LEMD3Q9Y2U8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC27.36■■□□□ 1.97
LEMD3Q9Y2U8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
LEMD3Q9Y2U8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
LEMD3Q9Y2U8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC27.36■■□□□ 1.97
LEMD3Q9Y2U8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
LEMD3Q9Y2U8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
LEMD3Q9Y2U8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
LEMD3Q9Y2U8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC27.35■■□□□ 1.97
LEMD3Q9Y2U8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC27.35■■□□□ 1.97
LEMD3Q9Y2U8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC27.35■■□□□ 1.97
LEMD3Q9Y2U8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
LEMD3Q9Y2U8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
LEMD3Q9Y2U8 DUX4L2-201ENST00000561772 1275 ntBASIC27.35■■□□□ 1.97
LEMD3Q9Y2U8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC27.35■■□□□ 1.97
LEMD3Q9Y2U8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
LEMD3Q9Y2U8 DUX4L6-201ENST00000626483 1275 ntBASIC27.35■■□□□ 1.97
LEMD3Q9Y2U8 DUX4L1-201ENST00000627662 1275 ntBASIC27.35■■□□□ 1.97
LEMD3Q9Y2U8 DUX4L8-201ENST00000629013 1275 ntBASIC27.35■■□□□ 1.97
LEMD3Q9Y2U8 DUX4L3-201ENST00000630187 1275 ntBASIC27.35■■□□□ 1.97
LEMD3Q9Y2U8 DUX4L7-201ENST00000630678 1275 ntBASIC27.35■■□□□ 1.97
LEMD3Q9Y2U8 DUX4L5-201ENST00000630834 1275 ntBASIC27.35■■□□□ 1.97
LEMD3Q9Y2U8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC27.35■■□□□ 1.97
LEMD3Q9Y2U8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC27.34■■□□□ 1.97
LEMD3Q9Y2U8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
LEMD3Q9Y2U8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
LEMD3Q9Y2U8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
LEMD3Q9Y2U8 KRT18P5-201ENST00000436075 1291 ntBASIC27.34■■□□□ 1.97
LEMD3Q9Y2U8 MIR6084-201ENST00000622012 110 ntBASIC27.34■■□□□ 1.97
LEMD3Q9Y2U8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LEMD3Q9Y2U8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LEMD3Q9Y2U8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
LEMD3Q9Y2U8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC27.33■■□□□ 1.97
LEMD3Q9Y2U8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC27.33■■□□□ 1.97
LEMD3Q9Y2U8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
LEMD3Q9Y2U8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LEMD3Q9Y2U8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
LEMD3Q9Y2U8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
LEMD3Q9Y2U8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
LEMD3Q9Y2U8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
LEMD3Q9Y2U8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
LEMD3Q9Y2U8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC27.32■■□□□ 1.96
LEMD3Q9Y2U8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
LEMD3Q9Y2U8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC27.32■■□□□ 1.96
LEMD3Q9Y2U8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC27.32■■□□□ 1.96
LEMD3Q9Y2U8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC27.32■■□□□ 1.96
LEMD3Q9Y2U8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC27.32■■□□□ 1.96
LEMD3Q9Y2U8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
LEMD3Q9Y2U8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC27.32■■□□□ 1.96
LEMD3Q9Y2U8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
LEMD3Q9Y2U8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
LEMD3Q9Y2U8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
LEMD3Q9Y2U8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC27.31■■□□□ 1.96
LEMD3Q9Y2U8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
LEMD3Q9Y2U8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
LEMD3Q9Y2U8 AC020928.2-201ENST00000588717 2197 ntBASIC27.31■■□□□ 1.96
LEMD3Q9Y2U8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
LEMD3Q9Y2U8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LEMD3Q9Y2U8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC27.3■■□□□ 1.96
LEMD3Q9Y2U8 AC022517.1-201ENST00000592429 346 ntBASIC27.3■■□□□ 1.96
LEMD3Q9Y2U8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
LEMD3Q9Y2U8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC27.3■■□□□ 1.96
LEMD3Q9Y2U8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC27.3■■□□□ 1.96
LEMD3Q9Y2U8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC27.3■■□□□ 1.96
LEMD3Q9Y2U8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
LEMD3Q9Y2U8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
LEMD3Q9Y2U8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC27.29■■□□□ 1.96
LEMD3Q9Y2U8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
LEMD3Q9Y2U8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC27.29■■□□□ 1.96
LEMD3Q9Y2U8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
LEMD3Q9Y2U8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
LEMD3Q9Y2U8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC27.28■■□□□ 1.96
LEMD3Q9Y2U8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
LEMD3Q9Y2U8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LEMD3Q9Y2U8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.28■■□□□ 1.96
LEMD3Q9Y2U8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC27.28■■□□□ 1.96
LEMD3Q9Y2U8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.27■■□□□ 1.96
LEMD3Q9Y2U8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
LEMD3Q9Y2U8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
LEMD3Q9Y2U8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC27.27■■□□□ 1.96
LEMD3Q9Y2U8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC27.27■■□□□ 1.96
LEMD3Q9Y2U8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
LEMD3Q9Y2U8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
LEMD3Q9Y2U8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
LEMD3Q9Y2U8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
LEMD3Q9Y2U8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
LEMD3Q9Y2U8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC27.27■■□□□ 1.96
LEMD3Q9Y2U8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms