Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 SNX10-208ENST00000462993 806 ntTSL 1 (best)5.41□□□□□ -1.544e-7■■□□□ 13.7
FUBP3Q96I24 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.39□□□□□ -1.554e-7■■□□□ 13.7
FUBP3Q96I24 NADK2-204ENST00000404560 3317 ntTSL 1 (best)5.08□□□□□ -1.64e-7■■□□□ 13.7
FUBP3Q96I24 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.06□□□□□ -1.64e-7■■□□□ 13.7
FUBP3Q96I24 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.02□□□□□ -1.614e-7■■□□□ 13.7
FUBP3Q96I24 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.84e-7■■□□□ 13.7
FUBP3Q96I24 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.193e-7■■□□□ 13.7
FUBP3Q96I24 WDR45B-205ENST00000572583 2322 ntTSL 1 (best)16.05■□□□□ 0.163e-7■■□□□ 13.7
FUBP3Q96I24 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.083e-7■■□□□ 13.7
FUBP3Q96I24 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.083e-7■■□□□ 13.7
FUBP3Q96I24 WDR45B-209ENST00000576517 779 ntTSL 37.46□□□□□ -1.223e-7■■□□□ 13.7
FUBP3Q96I24 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.77□□□□□ -1.653e-7■■□□□ 13.7
FUBP3Q96I24 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.182e-6■■□□□ 13.6
FUBP3Q96I24 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.312e-6■■□□□ 13.6
FUBP3Q96I24 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.496e-7■■□□□ 13.6
FUBP3Q96I24 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.22□□□□□ -1.899e-8■■□□□ 13.6
FUBP3Q96I24 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.36□□□□□ -1.231e-7■■□□□ 13.6
FUBP3Q96I24 TSNAX-DISC1-203ENST00000602885 3048 ntAPPRIS ALT2 TSL 214.14□□□□□ -0.154e-11■■□□□ 13.5
FUBP3Q96I24 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.94□□□□□ -0.184e-11■■□□□ 13.5
FUBP3Q96I24 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.15□□□□□ -0.34e-11■■□□□ 13.5
FUBP3Q96I24 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.374e-11■■□□□ 13.5
FUBP3Q96I24 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.448e-8■■□□□ 13.5
FUBP3Q96I24 TSNAX-DISC1-204ENST00000602956 3294 ntAPPRIS P5 TSL 210.91□□□□□ -0.664e-11■■□□□ 13.5
FUBP3Q96I24 TSNAX-DISC1-202ENST00000602634 3429 ntAPPRIS ALT2 TSL 210.74□□□□□ -0.694e-11■■□□□ 13.5
FUBP3Q96I24 TSNAX-201ENST00000366639 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.734e-11■■□□□ 13.5
FUBP3Q96I24 TSNAX-DISC1-205ENST00000602962 3557 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.774e-11■■□□□ 13.5
FUBP3Q96I24 TSNAX-DISC1-201ENST00000602567 3454 ntAPPRIS ALT2 TSL 210.02□□□□□ -0.814e-11■■□□□ 13.5
FUBP3Q96I24 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.954e-11■■□□□ 13.5
FUBP3Q96I24 TSNAX-203ENST00000475168 5629 ntTSL 27.51□□□□□ -1.214e-11■■□□□ 13.5
FUBP3Q96I24 EAF1-201ENST00000396842 4690 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.683e-7■■□□□ 13.5
FUBP3Q96I24 EAF1-203ENST00000617675 556 ntTSL 46.92□□□□□ -1.33e-7■■□□□ 13.5
FUBP3Q96I24 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.268e-9■■□□□ 13.5
FUBP3Q96I24 ZFR-206ENST00000510369 1551 ntTSL 1 (best)5.36□□□□□ -1.558e-9■■□□□ 13.5
FUBP3Q96I24 ZFR-202ENST00000502988 2184 ntTSL 1 (best)5.36□□□□□ -1.558e-9■■□□□ 13.5
FUBP3Q96I24 ZFR-207ENST00000514356 3109 ntTSL 24.16□□□□□ -1.748e-9■■□□□ 13.5
FUBP3Q96I24 CLK1-209ENST00000472679 461 ntTSL 27.67□□□□□ -1.186e-7■■□□□ 13.5
FUBP3Q96I24 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.71□□□□□ -1.56e-7■■□□□ 13.5
FUBP3Q96I24 CLK1-208ENST00000464454 484 ntTSL 25.48□□□□□ -1.536e-7■■□□□ 13.5
FUBP3Q96I24 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.79□□□□□ -0.361e-7■■□□□ 13.5
FUBP3Q96I24 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC11.88□□□□□ -0.511e-7■■□□□ 13.5
FUBP3Q96I24 ATP2A2-203ENST00000377685 5702 ntTSL 521.25■□□□□ 0.992e-6■■□□□ 13.5
FUBP3Q96I24 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.452e-6■■□□□ 13.5
FUBP3Q96I24 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.062e-6■■□□□ 13.5
FUBP3Q96I24 ATP2A2-202ENST00000313432 5575 ntTSL 1 (best)8.62□□□□□ -1.032e-6■■□□□ 13.5
FUBP3Q96I24 ATP2A2-212ENST00000553144 264 ntTSL 1 (best)5.01□□□□□ -1.612e-6■■□□□ 13.5
FUBP3Q96I24 NKTR-204ENST00000445842 560 ntTSL 524.84■■□□□ 1.578e-6■■□□□ 13.5
FUBP3Q96I24 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.6■□□□□ 0.578e-6■■□□□ 13.5
FUBP3Q96I24 NKTR-214ENST00000478488 698 ntTSL 318.44■□□□□ 0.548e-6■■□□□ 13.5
FUBP3Q96I24 NKTR-215ENST00000487466 2335 ntTSL 216.53■□□□□ 0.248e-6■■□□□ 13.5
FUBP3Q96I24 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.78e-6■■□□□ 13.5
FUBP3Q96I24 NKTR-211ENST00000468735 7964 ntTSL 27.64□□□□□ -1.198e-6■■□□□ 13.5
FUBP3Q96I24 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.08□□□□□ -1.768e-6■■□□□ 13.5
FUBP3Q96I24 NKTR-202ENST00000429888 7325 ntTSL 53.96□□□□□ -1.788e-6■■□□□ 13.5
FUBP3Q96I24 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.75e-11■■□□□ 13.4
FUBP3Q96I24 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.83■□□□□ 0.455e-11■■□□□ 13.4
FUBP3Q96I24 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC8.36□□□□□ -1.076e-8■■□□□ 13.4
FUBP3Q96I24 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.93■□□□□ 0.34e-14■■□□□ 13.4
FUBP3Q96I24 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.89□□□□□ -0.032e-6■■□□□ 13.4
FUBP3Q96I24 FTX-211ENST00000603672 1077 ntTSL 513.58□□□□□ -0.242e-6■■□□□ 13.4
FUBP3Q96I24 FTX-209ENST00000602812 2356 ntTSL 1 (best)10.66□□□□□ -0.72e-6■■□□□ 13.4
FUBP3Q96I24 FTX-215ENST00000638681 9771 ntTSL 5 BASIC9.21□□□□□ -0.932e-6■■□□□ 13.4
FUBP3Q96I24 FTX-206ENST00000602420 751 ntTSL 35.93□□□□□ -1.462e-6■■□□□ 13.4
FUBP3Q96I24 FTX-218ENST00000641360 3897 nt5.43□□□□□ -1.542e-6■■□□□ 13.4
FUBP3Q96I24 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.99□□□□□ -1.612e-6■■□□□ 13.4
FUBP3Q96I24 STK35-202ENST00000493263 1595 ntTSL 1 (best)21.96■■□□□ 1.113e-8■■□□□ 13.3
FUBP3Q96I24 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.073e-8■■□□□ 13.3
FUBP3Q96I24 AC124312.4-201ENST00000605533 310 ntBASIC5.55□□□□□ -1.522e-11■■□□□ 13.3
FUBP3Q96I24 PRRC2B-208ENST00000465931 5366 ntTSL 212.43□□□□□ -0.421e-7■■□□□ 13.3
FUBP3Q96I24 PRRC2B-201ENST00000320547 4950 ntTSL 212.16□□□□□ -0.461e-7■■□□□ 13.3
FUBP3Q96I24 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.721e-7■■□□□ 13.3
FUBP3Q96I24 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC9.69□□□□□ -0.861e-7■■□□□ 13.3
FUBP3Q96I24 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.055e-9■■□□□ 13.3
FUBP3Q96I24 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.68e-9■■□□□ 13.3
FUBP3Q96I24 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.418e-9■■□□□ 13.3
FUBP3Q96I24 DCAF7-202ENST00000431926 1354 ntTSL 1 (best)15.74■□□□□ 0.118e-9■■□□□ 13.3
FUBP3Q96I24 SLC39A7-204ENST00000463972 1410 ntTSL 214.01□□□□□ -0.178e-9■■□□□ 13.3
FUBP3Q96I24 DCAF7-203ENST00000580091 325 ntTSL 310.49□□□□□ -0.738e-9■■□□□ 13.3
FUBP3Q96I24 DCAF7-205ENST00000614556 6340 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.768e-9■■□□□ 13.3
FUBP3Q96I24 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.961e-13■■□□□ 13.3
FUBP3Q96I24 KIF13A-206ENST00000502297 4009 ntTSL 57.87□□□□□ -1.151e-13■■□□□ 13.3
FUBP3Q96I24 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.812e-6■■□□□ 13.3
FUBP3Q96I24 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.53□□□□□ -1.683e-12■■□□□ 13.2
FUBP3Q96I24 RAB1A-205ENST00000494188 771 ntTSL 224.48■■□□□ 1.511e-8■■□□□ 13.2
FUBP3Q96I24 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.71■■□□□ 1.231e-8■■□□□ 13.2
FUBP3Q96I24 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.15■□□□□ 0.341e-8■■□□□ 13.2
FUBP3Q96I24 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.061e-8■■□□□ 13.2
FUBP3Q96I24 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.32■□□□□ 0.041e-8■■□□□ 13.2
FUBP3Q96I24 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.46e-6■■□□□ 13.2
FUBP3Q96I24 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.036e-6■■□□□ 13.2
FUBP3Q96I24 C7orf73-203ENST00000509448 581 ntTSL 418.62■□□□□ 0.576e-6■■□□□ 13.2
FUBP3Q96I24 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.426e-6■■□□□ 13.2
FUBP3Q96I24 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.16■□□□□ 0.346e-6■■□□□ 13.2
FUBP3Q96I24 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.296e-6■■□□□ 13.2
FUBP3Q96I24 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.91■□□□□ 0.146e-6■■□□□ 13.2
FUBP3Q96I24 UXS1-210ENST00000473338 1547 ntTSL 1 (best)15.63■□□□□ 0.096e-6■■□□□ 13.2
FUBP3Q96I24 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.076e-6■■□□□ 13.2
FUBP3Q96I24 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.49■□□□□ 0.071e-10■■□□□ 13.2
FUBP3Q96I24 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.071e-10■■□□□ 13.2
FUBP3Q96I24 CCNL1-217ENST00000476367 1603 ntTSL 1 (best)15.28■□□□□ 0.046e-6■■□□□ 13.2
FUBP3Q96I24 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.04■□□□□ -06e-6■■□□□ 13.2
Retrieved 100 of 4,568 protein–RNA pairs in 276.6 ms