RNA–Protein interactions for RNA: ENST00000448492.6

CCDC117-205, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2 BASIC

Gene CCDC117, Length 3,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-205ENST00000448492 NISCHQ9Y2I1 1504 aa25.65■■□□□ 1.7
CCDC117-205ENST00000448492 SHROOM4Q9ULL8 1493 aa23.48■■□□□ 1.35
CCDC117-205ENST00000448492 DCAF8L2P0C7V8 631 aa23.38■■□□□ 1.33
CCDC117-205ENST00000448492 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
CCDC117-205ENST00000448492 PCGF6Q9BYE7 350 aa22.09■■□□□ 1.13
CCDC117-205ENST00000448492 EHMT2Q96KQ7 1210 aa22.05■■□□□ 1.12
CCDC117-205ENST00000448492 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
CCDC117-205ENST00000448492 PPARGC1BQ86YN6 1023 aaKnown RBP21.85■■□□□ 1.09
CCDC117-205ENST00000448492 PELP1Q8IZL8 1130 aaKnown RBP21.82■■□□□ 1.08
CCDC117-205ENST00000448492 LOC105371045A0A1W2PR82 267 aa21.79■■□□□ 1.08
CCDC117-205ENST00000448492 HRCP23327 699 aa21.77■■□□□ 1.08
CCDC117-205ENST00000448492 FAM9AQ8IZU1 332 aaPredicted RBP21.77■■□□□ 1.08
CCDC117-205ENST00000448492 ZCCHC6Q5VYS8 1495 aaKnown RBP21.54■■□□□ 1.04
CCDC117-205ENST00000448492 MYO15BQ96JP2 1530 aa21.47■■□□□ 1.03
CCDC117-205ENST00000448492 TRIM41Q8WV44 630 aa21.4■■□□□ 1.02
CCDC117-205ENST00000448492 TTBK1Q5TCY1 1321 aaPredicted RBP21.28■■□□□ 1
CCDC117-205ENST00000448492 TRIM26Q12899 539 aaPredicted RBP21.13■□□□□ 0.97
CCDC117-205ENST00000448492 MYT1Q01538 1121 aa21.12■□□□□ 0.97
CCDC117-205ENST00000448492 CCDC180Q9P1Z9 1646 aa21.07■□□□□ 0.96
CCDC117-205ENST00000448492 ABCC9O60706 1549 aa20.86■□□□□ 0.93
CCDC117-205ENST00000448492 SCAF1Q9H7N4 1312 aaKnown RBP20.85■□□□□ 0.93
CCDC117-205ENST00000448492 CCER1Q8TC90 406 aaPredicted RBP20.78■□□□□ 0.92
CCDC117-205ENST00000448492 SCRIBQ14160 1630 aa20.78■□□□□ 0.92
CCDC117-205ENST00000448492 YTHDC1Q96MU7 727 aaKnown RBP20.78■□□□□ 0.92
CCDC117-205ENST00000448492 CENPBP07199 599 aaPredicted RBP20.77■□□□□ 0.92
CCDC117-205ENST00000448492 RANGAP1P46060 587 aaPredicted RBP20.76■□□□□ 0.91
CCDC117-205ENST00000448492 ZEB1P37275 1124 aaPredicted RBP20.72■□□□□ 0.91
CCDC117-205ENST00000448492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.71■□□□□ 0.91
CCDC117-205ENST00000448492 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
CCDC117-205ENST00000448492 GTF3C3Q9Y5Q9 886 aa20.66■□□□□ 0.9
CCDC117-205ENST00000448492 UBTFP17480 764 aaKnown RBP20.64■□□□□ 0.9
CCDC117-205ENST00000448492 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
CCDC117-205ENST00000448492 PABPN1Q86U42 306 aaKnown RBP eCLIP20.47■□□□□ 0.87
CCDC117-205ENST00000448492 ACIN1Q9UKV3 1341 aaKnown RBP20.4■□□□□ 0.86
CCDC117-205ENST00000448492 CECR2Q9BXF3 1484 aa20.39■□□□□ 0.85
CCDC117-205ENST00000448492 NEUROD1Q13562 356 aa20.38■□□□□ 0.85
CCDC117-205ENST00000448492 APLP2Q06481 763 aa20.34■□□□□ 0.85
CCDC117-205ENST00000448492 HNRNPUL2Q1KMD3 747 aaKnown RBP20.33■□□□□ 0.84
CCDC117-205ENST00000448492 RB1CC1Q8TDY2 1594 aa20.32■□□□□ 0.84
CCDC117-205ENST00000448492 DIEXFQ68CQ4 756 aaKnown RBP20.22■□□□□ 0.83
CCDC117-205ENST00000448492 MROH2BQ7Z745 1585 aa20.14■□□□□ 0.81
CCDC117-205ENST00000448492 CSRNP3Q8WYN3 585 aa20.09■□□□□ 0.81
CCDC117-205ENST00000448492 ITGAEP38570 1179 aa20.01■□□□□ 0.79
CCDC117-205ENST00000448492 WIZO95785 1651 aa19.95■□□□□ 0.78
CCDC117-205ENST00000448492 ATP1B4Q9UN42 357 aaPredicted RBP19.94■□□□□ 0.78
CCDC117-205ENST00000448492 SOGA1O94964 1423 aa19.89■□□□□ 0.77
CCDC117-205ENST00000448492 ABCC8Q09428 1581 aa19.89■□□□□ 0.77
CCDC117-205ENST00000448492 ERICH6Q7L0X2 663 aa19.89■□□□□ 0.77
CCDC117-205ENST00000448492 NACADO15069 1562 aa19.88■□□□□ 0.77
CCDC117-205ENST00000448492 CCDC88BA6NC98 1476 aa19.85■□□□□ 0.77
CCDC117-205ENST00000448492 CEP162Q5TB80 1403 aa19.85■□□□□ 0.77
CCDC117-205ENST00000448492 ZNF316A6NFI3 1004 aaPredicted RBP19.81■□□□□ 0.76
CCDC117-205ENST00000448492 BCANQ96GW7 911 aa19.8■□□□□ 0.76
CCDC117-205ENST00000448492 BCL11AQ9H165 835 aa19.79■□□□□ 0.76
CCDC117-205ENST00000448492 BAZ1AQ9NRL2 1556 aaPredicted RBP19.71■□□□□ 0.75
CCDC117-205ENST00000448492 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
CCDC117-205ENST00000448492 MIER1Q8N108 512 aa19.65■□□□□ 0.74
CCDC117-205ENST00000448492 TNIKQ9UKE5 1360 aa19.63■□□□□ 0.73
CCDC117-205ENST00000448492 WRNQ14191 1432 aaPredicted RBP eCLIP19.6■□□□□ 0.73
CCDC117-205ENST00000448492 CLIP1P30622 1438 aa19.58■□□□□ 0.72
CCDC117-205ENST00000448492 P3H3Q8IVL6 736 aa19.55■□□□□ 0.72
CCDC117-205ENST00000448492 GOLGA3Q08378 1498 aa19.52■□□□□ 0.72
CCDC117-205ENST00000448492 NEFLP07196 543 aa19.51■□□□□ 0.71
CCDC117-205ENST00000448492 FAM50AQ14320 339 aaKnown RBP19.49■□□□□ 0.71
CCDC117-205ENST00000448492 ANP32EQ9BTT0 268 aa19.49■□□□□ 0.71
CCDC117-205ENST00000448492 TOP2AP11388 1531 aaKnown RBP19.45■□□□□ 0.7
CCDC117-205ENST00000448492 EEA1Q15075 1411 aa19.42■□□□□ 0.7
CCDC117-205ENST00000448492 SMARCA4P51532 1647 aa19.39■□□□□ 0.69
CCDC117-205ENST00000448492 SMARCA2P51531 1590 aa19.36■□□□□ 0.69
CCDC117-205ENST00000448492 KANK4Q5T7N3 995 aaPredicted RBP19.36■□□□□ 0.69
CCDC117-205ENST00000448492 CEP164Q9UPV0 1460 aa19.34■□□□□ 0.69
CCDC117-205ENST00000448492 BAZ1BQ9UIG0 1483 aaKnown RBP19.34■□□□□ 0.69
CCDC117-205ENST00000448492 HIRIP3Q9BW71 556 aaPredicted RBP19.32■□□□□ 0.68
CCDC117-205ENST00000448492 RAPGEF2Q9Y4G8 1499 aa19.28■□□□□ 0.68
CCDC117-205ENST00000448492 CNGB1Q14028 1251 aaPredicted RBP19.23■□□□□ 0.67
CCDC117-205ENST00000448492 VPS8Q8N3P4 1428 aa19.23■□□□□ 0.67
CCDC117-205ENST00000448492 DDX10Q13206 875 aaKnown RBP19.2■□□□□ 0.66
CCDC117-205ENST00000448492 FKBP8Q14318 412 aa19.2■□□□□ 0.66
CCDC117-205ENST00000448492 ARID3CA6NKF2 412 aa19.19■□□□□ 0.66
CCDC117-205ENST00000448492 SUPT16HQ9Y5B9 1047 aaKnown RBP19.15■□□□□ 0.66
CCDC117-205ENST00000448492 ATAD2BQ9ULI0 1458 aa19.14■□□□□ 0.65
CCDC117-205ENST00000448492 SIN3AQ96ST3 1273 aa19.13■□□□□ 0.65
CCDC117-205ENST00000448492 TSHZ2Q9NRE2 1034 aa19.09■□□□□ 0.65
CCDC117-205ENST00000448492 SYNJ1O43426 1573 aa19.07■□□□□ 0.64
CCDC117-205ENST00000448492 TRIM52Q96A61 297 aa19.04■□□□□ 0.64
CCDC117-205ENST00000448492 KIF27Q86VH2 1401 aa19.04■□□□□ 0.64
CCDC117-205ENST00000448492 KCNH8Q96L42 1107 aa19.04■□□□□ 0.64
CCDC117-205ENST00000448492 POLR3GLQ9BT43 218 aa19.02■□□□□ 0.64
CCDC117-205ENST00000448492 NBR1Q14596 966 aa19.01■□□□□ 0.63
CCDC117-205ENST00000448492 PRKCSHP14314 528 aaPredicted RBP18.99■□□□□ 0.63
CCDC117-205ENST00000448492 EIF4G1Q04637 1599 aaKnown RBP18.99■□□□□ 0.63
CCDC117-205ENST00000448492 CCNB3Q8WWL7 1395 aa18.99■□□□□ 0.63
CCDC117-205ENST00000448492 DHX57Q6P158 1386 aaKnown RBP18.98■□□□□ 0.63
CCDC117-205ENST00000448492 CHIC2Q9UKJ5 165 aa18.97■□□□□ 0.63
CCDC117-205ENST00000448492 EIF5BO60841 1220 aaKnown RBP18.96■□□□□ 0.63
CCDC117-205ENST00000448492 RTL5Q5HYW3 569 aaPredicted RBP18.95■□□□□ 0.62
CCDC117-205ENST00000448492 ANP32CO43423 234 aa18.94■□□□□ 0.62
CCDC117-205ENST00000448492 CUX2O14529 1486 aa18.93■□□□□ 0.62
CCDC117-205ENST00000448492 KIF21BO75037 1637 aa18.93■□□□□ 0.62
CCDC117-205ENST00000448492 RTN4Q9NQC3 1192 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms