RNA–Protein interactions for RNA: ENST00000421503.6

CCDC117-202, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2 BASIC

Gene CCDC117, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-202ENST00000421503 NISCHQ9Y2I1 1504 aa26.85■■□□□ 1.89
CCDC117-202ENST00000421503 SHROOM4Q9ULL8 1493 aa24.83■■□□□ 1.57
CCDC117-202ENST00000421503 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
CCDC117-202ENST00000421503 DCAF8L2P0C7V8 631 aa24.66■■□□□ 1.54
CCDC117-202ENST00000421503 PCGF6Q9BYE7 350 aa23.66■■□□□ 1.38
CCDC117-202ENST00000421503 EHMT2Q96KQ7 1210 aa23.45■■□□□ 1.35
CCDC117-202ENST00000421503 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
CCDC117-202ENST00000421503 PPARGC1BQ86YN6 1023 aaKnown RBP23.18■■□□□ 1.3
CCDC117-202ENST00000421503 HRCP23327 699 aa23.18■■□□□ 1.3
CCDC117-202ENST00000421503 LOC105371045A0A1W2PR82 267 aa23.18■■□□□ 1.3
CCDC117-202ENST00000421503 FAM9AQ8IZU1 332 aaPredicted RBP23.13■■□□□ 1.29
CCDC117-202ENST00000421503 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.23
CCDC117-202ENST00000421503 TRIM41Q8WV44 630 aa22.69■■□□□ 1.22
CCDC117-202ENST00000421503 TTBK1Q5TCY1 1321 aaPredicted RBP22.67■■□□□ 1.22
CCDC117-202ENST00000421503 TRIM26Q12899 539 aaPredicted RBP22.58■■□□□ 1.2
CCDC117-202ENST00000421503 ZCCHC6Q5VYS8 1495 aaKnown RBP22.55■■□□□ 1.2
CCDC117-202ENST00000421503 ZEB1P37275 1124 aaPredicted RBP22.22■■□□□ 1.15
CCDC117-202ENST00000421503 CCER1Q8TC90 406 aaPredicted RBP22.22■■□□□ 1.15
CCDC117-202ENST00000421503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
CCDC117-202ENST00000421503 RANGAP1P46060 587 aaPredicted RBP22.02■■□□□ 1.12
CCDC117-202ENST00000421503 DCAF1Q9Y4B6 1507 aa21.99■■□□□ 1.11
CCDC117-202ENST00000421503 CCDC180Q9P1Z9 1646 aa21.91■■□□□ 1.1
CCDC117-202ENST00000421503 UBTFP17480 764 aaKnown RBP21.9■■□□□ 1.1
CCDC117-202ENST00000421503 YTHDC1Q96MU7 727 aaKnown RBP21.86■■□□□ 1.09
CCDC117-202ENST00000421503 SCRIBQ14160 1630 aa21.74■■□□□ 1.07
CCDC117-202ENST00000421503 ABCC9O60706 1549 aa21.74■■□□□ 1.07
CCDC117-202ENST00000421503 CENPBP07199 599 aaPredicted RBP21.69■■□□□ 1.06
CCDC117-202ENST00000421503 RSF1Q96T23 1441 aaPredicted RBP21.67■■□□□ 1.06
CCDC117-202ENST00000421503 SCAF1Q9H7N4 1312 aaKnown RBP21.66■■□□□ 1.06
CCDC117-202ENST00000421503 HNRNPUL2Q1KMD3 747 aaKnown RBP21.65■■□□□ 1.06
CCDC117-202ENST00000421503 APLP2Q06481 763 aa21.64■■□□□ 1.05
CCDC117-202ENST00000421503 DIEXFQ68CQ4 756 aaKnown RBP21.64■■□□□ 1.05
CCDC117-202ENST00000421503 PELP1Q8IZL8 1130 aaKnown RBP21.6■■□□□ 1.05
CCDC117-202ENST00000421503 GTF3C3Q9Y5Q9 886 aa21.52■■□□□ 1.04
CCDC117-202ENST00000421503 NEUROD1Q13562 356 aa21.46■■□□□ 1.03
CCDC117-202ENST00000421503 PABPN1Q86U42 306 aaKnown RBP eCLIP21.43■■□□□ 1.02
CCDC117-202ENST00000421503 ACIN1Q9UKV3 1341 aaKnown RBP21.42■■□□□ 1.02
CCDC117-202ENST00000421503 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
CCDC117-202ENST00000421503 RB1CC1Q8TDY2 1594 aa21.34■■□□□ 1.01
CCDC117-202ENST00000421503 ITGAEP38570 1179 aa21.27■■□□□ 1
CCDC117-202ENST00000421503 CSRNP3Q8WYN3 585 aa21.24■□□□□ 0.99
CCDC117-202ENST00000421503 ZNF316A6NFI3 1004 aaPredicted RBP21.19■□□□□ 0.98
CCDC117-202ENST00000421503 ATP1B4Q9UN42 357 aaPredicted RBP21.14■□□□□ 0.98
CCDC117-202ENST00000421503 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
CCDC117-202ENST00000421503 MIER1Q8N108 512 aa21.03■□□□□ 0.96
CCDC117-202ENST00000421503 CEP162Q5TB80 1403 aa20.99■□□□□ 0.95
CCDC117-202ENST00000421503 SOGA1O94964 1423 aa20.97■□□□□ 0.95
CCDC117-202ENST00000421503 ABCC8Q09428 1581 aa20.91■□□□□ 0.94
CCDC117-202ENST00000421503 CCDC88BA6NC98 1476 aa20.9■□□□□ 0.94
CCDC117-202ENST00000421503 WIZO95785 1651 aa20.89■□□□□ 0.94
CCDC117-202ENST00000421503 BCANQ96GW7 911 aa20.79■□□□□ 0.92
CCDC117-202ENST00000421503 TNIKQ9UKE5 1360 aa20.75■□□□□ 0.91
CCDC117-202ENST00000421503 RUSC2Q8N2Y8 1516 aa20.75■□□□□ 0.91
CCDC117-202ENST00000421503 NACADO15069 1562 aa20.71■□□□□ 0.91
CCDC117-202ENST00000421503 CLIP1P30622 1438 aa20.7■□□□□ 0.9
CCDC117-202ENST00000421503 FAM50AQ14320 339 aaKnown RBP20.68■□□□□ 0.9
CCDC117-202ENST00000421503 P3H3Q8IVL6 736 aa20.66■□□□□ 0.9
CCDC117-202ENST00000421503 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
CCDC117-202ENST00000421503 WRNQ14191 1432 aaPredicted RBP eCLIP20.62■□□□□ 0.89
CCDC117-202ENST00000421503 GOLGA3Q08378 1498 aa20.61■□□□□ 0.89
CCDC117-202ENST00000421503 HIRIP3Q9BW71 556 aaPredicted RBP20.57■□□□□ 0.88
CCDC117-202ENST00000421503 MYT1Q01538 1121 aa20.56■□□□□ 0.88
CCDC117-202ENST00000421503 NEFLP07196 543 aa20.55■□□□□ 0.88
CCDC117-202ENST00000421503 CNGB1Q14028 1251 aaPredicted RBP20.53■□□□□ 0.88
CCDC117-202ENST00000421503 DDX10Q13206 875 aaKnown RBP20.5■□□□□ 0.87
CCDC117-202ENST00000421503 EEA1Q15075 1411 aa20.48■□□□□ 0.87
CCDC117-202ENST00000421503 KANK4Q5T7N3 995 aaPredicted RBP20.47■□□□□ 0.87
CCDC117-202ENST00000421503 CEP164Q9UPV0 1460 aa20.4■□□□□ 0.86
CCDC117-202ENST00000421503 FKBP8Q14318 412 aa20.37■□□□□ 0.85
CCDC117-202ENST00000421503 TRIM52Q96A61 297 aa20.37■□□□□ 0.85
CCDC117-202ENST00000421503 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
CCDC117-202ENST00000421503 SIN3AQ96ST3 1273 aa20.33■□□□□ 0.84
CCDC117-202ENST00000421503 KCNH8Q96L42 1107 aa20.32■□□□□ 0.84
CCDC117-202ENST00000421503 VPS8Q8N3P4 1428 aa20.32■□□□□ 0.84
CCDC117-202ENST00000421503 SUPT16HQ9Y5B9 1047 aaKnown RBP20.31■□□□□ 0.84
CCDC117-202ENST00000421503 RAPGEF2Q9Y4G8 1499 aa20.31■□□□□ 0.84
CCDC117-202ENST00000421503 POLR3GLQ9BT43 218 aa20.29■□□□□ 0.84
CCDC117-202ENST00000421503 ARID3CA6NKF2 412 aa20.28■□□□□ 0.84
CCDC117-202ENST00000421503 SMARCA2P51531 1590 aa20.27■□□□□ 0.84
CCDC117-202ENST00000421503 ERICH6Q7L0X2 663 aa20.25■□□□□ 0.83
CCDC117-202ENST00000421503 SMARCA4P51532 1647 aa20.25■□□□□ 0.83
CCDC117-202ENST00000421503 ANP32CO43423 234 aa20.24■□□□□ 0.83
CCDC117-202ENST00000421503 BAZ1BQ9UIG0 1483 aaKnown RBP20.24■□□□□ 0.83
CCDC117-202ENST00000421503 IRX6P78412 446 aaPredicted RBP20.17■□□□□ 0.82
CCDC117-202ENST00000421503 DHX57Q6P158 1386 aaKnown RBP20.14■□□□□ 0.81
CCDC117-202ENST00000421503 CCNB3Q8WWL7 1395 aa20.1■□□□□ 0.81
CCDC117-202ENST00000421503 CHIC2Q9UKJ5 165 aa20.09■□□□□ 0.81
CCDC117-202ENST00000421503 HNRNPUQ00839 825 aaKnown RBP eCLIP20.06■□□□□ 0.8
CCDC117-202ENST00000421503 KIF27Q86VH2 1401 aa20.03■□□□□ 0.8
CCDC117-202ENST00000421503 CLSPNQ9HAW4 1339 aa20.03■□□□□ 0.8
CCDC117-202ENST00000421503 SENP3-EIF4A1A0A087X0R7 540 aa20.03■□□□□ 0.8
CCDC117-202ENST00000421503 TSHZ2Q9NRE2 1034 aa20.02■□□□□ 0.8
CCDC117-202ENST00000421503 TONSLQ96HA7 1378 aa20.02■□□□□ 0.79
CCDC117-202ENST00000421503 RAB3GAP2Q9H2M9 1393 aa20.01■□□□□ 0.79
CCDC117-202ENST00000421503 SYNJ1O43426 1573 aa20■□□□□ 0.79
CCDC117-202ENST00000421503 ZNF326Q5BKZ1 582 aaKnown RBP19.99■□□□□ 0.79
CCDC117-202ENST00000421503 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
CCDC117-202ENST00000421503 RRP7BPQ9NSQ0 103 aa19.95■□□□□ 0.78
CCDC117-202ENST00000421503 KIF21BO75037 1637 aa19.95■□□□□ 0.78
CCDC117-202ENST00000421503 FAM9BQ8IZU0 186 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms