RNA–Protein interactions for RNA: ENST00000405409.6

RBFOX2-205, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 6,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-205ENST00000405409 PELP1Q8IZL8 1130 aaKnown RBP13.04□□□□□ -0.32
RBFOX2-205ENST00000405409 DCAF8L2P0C7V8 631 aa12.91□□□□□ -0.34
RBFOX2-205ENST00000405409 ERICH6Q7L0X2 663 aa12.69□□□□□ -0.38
RBFOX2-205ENST00000405409 CCER1Q8TC90 406 aaPredicted RBP12.44□□□□□ -0.42
RBFOX2-205ENST00000405409 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
RBFOX2-205ENST00000405409 MYT1Q01538 1121 aa12.37□□□□□ -0.43
RBFOX2-205ENST00000405409 SUPT5HO00267 1087 aaKnown RBP12.34□□□□□ -0.43
RBFOX2-205ENST00000405409 NISCHQ9Y2I1 1504 aa12.23□□□□□ -0.45
RBFOX2-205ENST00000405409 CENPBP07199 599 aaPredicted RBP12.21□□□□□ -0.45
RBFOX2-205ENST00000405409 APLP2Q06481 763 aa12.14□□□□□ -0.47
RBFOX2-205ENST00000405409 TTBK1Q5TCY1 1321 aaPredicted RBP12.07□□□□□ -0.48
RBFOX2-205ENST00000405409 NEFLP07196 543 aa12.04□□□□□ -0.48
RBFOX2-205ENST00000405409 PCGF6Q9BYE7 350 aa11.99□□□□□ -0.49
RBFOX2-205ENST00000405409 YTHDC1Q96MU7 727 aaKnown RBP11.98□□□□□ -0.49
RBFOX2-205ENST00000405409 DAXXQ9UER7 740 aaPredicted RBP11.94□□□□□ -0.5
RBFOX2-205ENST00000405409 SHROOM4Q9ULL8 1493 aa11.91□□□□□ -0.5
RBFOX2-205ENST00000405409 FAM9AQ8IZU1 332 aaPredicted RBP11.85□□□□□ -0.51
RBFOX2-205ENST00000405409 ZEB1P37275 1124 aaPredicted RBP11.83□□□□□ -0.52
RBFOX2-205ENST00000405409 RANGAP1P46060 587 aaPredicted RBP11.74□□□□□ -0.53
RBFOX2-205ENST00000405409 ATP1B4Q9UN42 357 aaPredicted RBP11.7□□□□□ -0.54
RBFOX2-205ENST00000405409 RTL5Q5HYW3 569 aaPredicted RBP11.65□□□□□ -0.54
RBFOX2-205ENST00000405409 ZNF316A6NFI3 1004 aaPredicted RBP11.65□□□□□ -0.55
RBFOX2-205ENST00000405409 POLR3GLQ9BT43 218 aa11.53□□□□□ -0.56
RBFOX2-205ENST00000405409 CLSPNQ9HAW4 1339 aa11.48□□□□□ -0.57
RBFOX2-205ENST00000405409 CNGB1Q14028 1251 aaPredicted RBP11.46□□□□□ -0.57
RBFOX2-205ENST00000405409 ABCC9O60706 1549 aa11.42□□□□□ -0.58
RBFOX2-205ENST00000405409 PPARGC1BQ86YN6 1023 aaKnown RBP11.38□□□□□ -0.59
RBFOX2-205ENST00000405409 UBTFP17480 764 aaKnown RBP11.37□□□□□ -0.59
RBFOX2-205ENST00000405409 SLC4A1APQ9BWU0 796 aaKnown RBP11.34□□□□□ -0.59
RBFOX2-205ENST00000405409 TRIM41Q8WV44 630 aa11.33□□□□□ -0.6
RBFOX2-205ENST00000405409 AEBP2Q6ZN18 517 aaPredicted RBP11.31□□□□□ -0.6
RBFOX2-205ENST00000405409 MYT1LQ9UL68 1186 aa11.3□□□□□ -0.6
RBFOX2-205ENST00000405409 EIF5BO60841 1220 aaKnown RBP11.29□□□□□ -0.6
RBFOX2-205ENST00000405409 HRCP23327 699 aa11.29□□□□□ -0.6
RBFOX2-205ENST00000405409 ITGAEP38570 1179 aa11.25□□□□□ -0.61
RBFOX2-205ENST00000405409 BCANQ96GW7 911 aa11.24□□□□□ -0.61
RBFOX2-205ENST00000405409 CHIC1Q5VXU3 224 aa11.24□□□□□ -0.61
RBFOX2-205ENST00000405409 TRIM26Q12899 539 aaPredicted RBP11.2□□□□□ -0.62
RBFOX2-205ENST00000405409 GLIPR1L2Q4G1C9 344 aa11.2□□□□□ -0.62
RBFOX2-205ENST00000405409 CDK11AQ9UQ88 783 aaPredicted RBP11.19□□□□□ -0.62
RBFOX2-205ENST00000405409 ZBTB47Q9UFB7 747 aaPredicted RBP11.17□□□□□ -0.62
RBFOX2-205ENST00000405409 BCL11AQ9H165 835 aa11.16□□□□□ -0.62
RBFOX2-205ENST00000405409 DIEXFQ68CQ4 756 aaKnown RBP11.11□□□□□ -0.63
RBFOX2-205ENST00000405409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.1□□□□□ -0.63
RBFOX2-205ENST00000405409 HNRNPUL2Q1KMD3 747 aaKnown RBP11.1□□□□□ -0.63
RBFOX2-205ENST00000405409 GTF3C3Q9Y5Q9 886 aa11.09□□□□□ -0.63
RBFOX2-205ENST00000405409 ANP32BQ92688 251 aaKnown RBP11.08□□□□□ -0.64
RBFOX2-205ENST00000405409 DNAJC5Q9H3Z4 198 aa11.07□□□□□ -0.64
RBFOX2-205ENST00000405409 ANP32AP39687 249 aaKnown RBP11.05□□□□□ -0.64
RBFOX2-205ENST00000405409 NPM2Q86SE8 214 aaKnown RBP11.05□□□□□ -0.64
RBFOX2-205ENST00000405409 SLC24A1O60721 1099 aa11.05□□□□□ -0.64
RBFOX2-205ENST00000405409 CANXP27824 592 aaKnown RBP11.04□□□□□ -0.64
RBFOX2-205ENST00000405409 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
RBFOX2-205ENST00000405409 ANP32CO43423 234 aa10.93□□□□□ -0.66
RBFOX2-205ENST00000405409 HSP90AA1P07900 732 aaKnown RBP10.92□□□□□ -0.66
RBFOX2-205ENST00000405409 ARXQ96QS3 562 aa10.92□□□□□ -0.66
RBFOX2-205ENST00000405409 NEUROD1Q13562 356 aa10.9□□□□□ -0.66
RBFOX2-205ENST00000405409 NBR1Q14596 966 aa10.89□□□□□ -0.67
RBFOX2-205ENST00000405409 RB1CC1Q8TDY2 1594 aa10.89□□□□□ -0.67
RBFOX2-205ENST00000405409 TRIM52Q96A61 297 aa10.86□□□□□ -0.67
RBFOX2-205ENST00000405409 FAM50AQ14320 339 aaKnown RBP10.84□□□□□ -0.67
RBFOX2-205ENST00000405409 ZNF326Q5BKZ1 582 aaKnown RBP10.83□□□□□ -0.68
RBFOX2-205ENST00000405409 NEFMP07197 916 aa10.81□□□□□ -0.68
RBFOX2-205ENST00000405409 LOC105371045A0A1W2PR82 267 aa10.8□□□□□ -0.68
RBFOX2-205ENST00000405409 CDK11BP21127 795 aaKnown RBP10.8□□□□□ -0.68
RBFOX2-205ENST00000405409 TNNT2P45379 298 aaPredicted RBP10.79□□□□□ -0.68
RBFOX2-205ENST00000405409 UPF2Q9HAU5 1272 aaKnown RBP10.79□□□□□ -0.68
RBFOX2-205ENST00000405409 ACIN1Q9UKV3 1341 aaKnown RBP10.75□□□□□ -0.69
RBFOX2-205ENST00000405409 FKBP8Q14318 412 aa10.74□□□□□ -0.69
RBFOX2-205ENST00000405409 AMER1Q5JTC6 1135 aaPredicted RBP10.69□□□□□ -0.7
RBFOX2-205ENST00000405409 TRIM44Q96DX7 344 aaPredicted RBP10.68□□□□□ -0.7
RBFOX2-205ENST00000405409 ERCC6Q03468 1493 aa10.67□□□□□ -0.7
RBFOX2-205ENST00000405409 TRHP20396 242 aaPredicted RBP10.63□□□□□ -0.71
RBFOX2-205ENST00000405409 CCDC180Q9P1Z9 1646 aa10.63□□□□□ -0.71
RBFOX2-205ENST00000405409 DNTTIP2Q5QJE6 756 aaKnown RBP10.62□□□□□ -0.71
RBFOX2-205ENST00000405409 NAP1L5Q96NT1 182 aaPredicted RBP10.61□□□□□ -0.71
RBFOX2-205ENST00000405409 PTMAP06454 111 aaKnown RBP10.59□□□□□ -0.71
RBFOX2-205ENST00000405409 NCLP19338 710 aaKnown RBP10.59□□□□□ -0.71
RBFOX2-205ENST00000405409 NACADO15069 1562 aa10.58□□□□□ -0.72
RBFOX2-205ENST00000405409 RTN4Q9NQC3 1192 aaKnown RBP10.58□□□□□ -0.72
RBFOX2-205ENST00000405409 SALL2Q9Y467 1007 aaPredicted RBP10.57□□□□□ -0.72
RBFOX2-205ENST00000405409 CCDC136Q96JN2 1154 aa10.57□□□□□ -0.72
RBFOX2-205ENST00000405409 TULP1O00294 542 aaPredicted RBP10.57□□□□□ -0.72
RBFOX2-205ENST00000405409 TPRNQ4KMQ1 711 aa10.56□□□□□ -0.72
RBFOX2-205ENST00000405409 CECR2Q9BXF3 1484 aa10.54□□□□□ -0.72
RBFOX2-205ENST00000405409 HNRNPUQ00839 825 aaKnown RBP eCLIP10.54□□□□□ -0.72
RBFOX2-205ENST00000405409 FAM9BQ8IZU0 186 aa10.54□□□□□ -0.72
RBFOX2-205ENST00000405409 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.54□□□□□ -0.72
RBFOX2-205ENST00000405409 DDRGK1Q96HY6 314 aa10.52□□□□□ -0.73
RBFOX2-205ENST00000405409 BECN1Q14457 450 aa10.51□□□□□ -0.73
RBFOX2-205ENST00000405409 ZRSR1Q15695 479 aaKnown RBP10.5□□□□□ -0.73
RBFOX2-205ENST00000405409 GOLGA6L22H0YM25 854 aa10.49□□□□□ -0.73
RBFOX2-205ENST00000405409 IRX6P78412 446 aaPredicted RBP10.48□□□□□ -0.73
RBFOX2-205ENST00000405409 ANP32EQ9BTT0 268 aa10.48□□□□□ -0.73
RBFOX2-205ENST00000405409 MYH16Q9H6N6 1097 aa10.47□□□□□ -0.73
RBFOX2-205ENST00000405409 CUX2O14529 1486 aa10.46□□□□□ -0.74
RBFOX2-205ENST00000405409 ERICH6BQ5W0A0 696 aa10.46□□□□□ -0.74
RBFOX2-205ENST00000405409 DNAJC5BQ9UF47 199 aa10.45□□□□□ -0.74
RBFOX2-205ENST00000405409 PLCB2Q00722 1185 aa10.43□□□□□ -0.74
RBFOX2-205ENST00000405409 NCBP3Q53F19 620 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms