RNA–Protein interactions for RNA: ENST00000409838.1

SNX10-204, Transcript of sorting nexin 10, humanhuman

TSL 1 (best) BASIC

Gene SNX10, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX10-204ENST00000409838 AEBP2Q6ZN18 517 aaPredicted RBP25.3■■□□□ 1.64
SNX10-204ENST00000409838 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
SNX10-204ENST00000409838 SENP3Q9H4L4 574 aaPredicted RBP21.49■■□□□ 1.03
SNX10-204ENST00000409838 PHF23Q9BUL5 403 aaPredicted RBP21.46■■□□□ 1.03
SNX10-204ENST00000409838 FOXD1Q16676 465 aa19.99■□□□□ 0.79
SNX10-204ENST00000409838 PLPPR3Q6T4P5 718 aa19.69■□□□□ 0.74
SNX10-204ENST00000409838 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
SNX10-204ENST00000409838 ADRA2BP18089 450 aa18.98■□□□□ 0.63
SNX10-204ENST00000409838 PIAS4Q8N2W9 510 aaPredicted RBP18.77■□□□□ 0.6
SNX10-204ENST00000409838 MSH5O43196 834 aa18.53■□□□□ 0.56
SNX10-204ENST00000409838 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
SNX10-204ENST00000409838 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
SNX10-204ENST00000409838 PPP4R3CPQ6ZMV5 832 aa17.32■□□□□ 0.36
SNX10-204ENST00000409838 MAPK8IP2Q13387 824 aaPredicted RBP17.31■□□□□ 0.36
SNX10-204ENST00000409838 DMRT2Q9Y5R5 561 aa17.11■□□□□ 0.33
SNX10-204ENST00000409838 CNKSR2Q8WXI2 1034 aa16.89■□□□□ 0.29
SNX10-204ENST00000409838 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
SNX10-204ENST00000409838 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
SNX10-204ENST00000409838 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
SNX10-204ENST00000409838 KCNA4P22459 653 aa16.6■□□□□ 0.25
SNX10-204ENST00000409838 NPM3O75607 178 aaKnown RBP16.55■□□□□ 0.24
SNX10-204ENST00000409838 DCAF8L1A6NGE4 600 aa16.38■□□□□ 0.21
SNX10-204ENST00000409838 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
SNX10-204ENST00000409838 RNF39Q9H2S5 420 aa15.87■□□□□ 0.13
SNX10-204ENST00000409838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.132e-6■■□□□ 13.1
SNX10-204ENST00000409838 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
SNX10-204ENST00000409838 SLC4A2P04920 1241 aa15.7■□□□□ 0.1
SNX10-204ENST00000409838 CACNB1Q02641 598 aaPredicted RBP15.65■□□□□ 0.1
SNX10-204ENST00000409838 C1QBPQ07021 282 aaKnown RBP15.65■□□□□ 0.1
SNX10-204ENST00000409838 U3KPZ7 1027 aaPredicted RBP15.58■□□□□ 0.08
SNX10-204ENST00000409838 FOXD4L1Q9NU39 408 aa15.36■□□□□ 0.05
SNX10-204ENST00000409838 ZBTB22O15209 634 aa15.28■□□□□ 0.04
SNX10-204ENST00000409838 MYCNP04198 464 aaPredicted RBP15.28■□□□□ 0.04
SNX10-204ENST00000409838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
SNX10-204ENST00000409838 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
SNX10-204ENST00000409838 SPINK5Q9NQ38 1064 aaPredicted RBP15.24■□□□□ 0.03
SNX10-204ENST00000409838 SAMD1Q6SPF0 538 aaPredicted RBP15.2■□□□□ 0.02
SNX10-204ENST00000409838 CAPN15O75808 1086 aa15.18■□□□□ 0.02
SNX10-204ENST00000409838 APLP2Q06481 763 aa15.16■□□□□ 0.02
SNX10-204ENST00000409838 TRHP20396 242 aaPredicted RBP15.03■□□□□ -0
SNX10-204ENST00000409838 ZNF219Q9P2Y4 722 aaPredicted RBP15.02■□□□□ -0
SNX10-204ENST00000409838 DSG3P32926 999 aa15□□□□□ -0.01
SNX10-204ENST00000409838 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
SNX10-204ENST00000409838 CSRNP3Q8WYN3 585 aa14.95□□□□□ -0.02
SNX10-204ENST00000409838 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
SNX10-204ENST00000409838 ABCB7O75027 752 aa14.87□□□□□ -0.03
SNX10-204ENST00000409838 ATXN8OSP0DMR3 200 aa14.83□□□□□ -0.04
SNX10-204ENST00000409838 POLA2Q14181 598 aa14.73□□□□□ -0.05
SNX10-204ENST00000409838 ZBTB12Q9Y330 459 aaPredicted RBP14.45□□□□□ -0.1
SNX10-204ENST00000409838 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
SNX10-204ENST00000409838 FBLN2P98095 1184 aa14.27□□□□□ -0.13
SNX10-204ENST00000409838 MKRN4PQ13434 485 aaPredicted RBP14.25□□□□□ -0.13
SNX10-204ENST00000409838 OSCARQ8IYS5 282 aa14.25□□□□□ -0.13
SNX10-204ENST00000409838 AKT1S1Q96B36 256 aa14.05□□□□□ -0.16
SNX10-204ENST00000409838 SPDYE2BA6NHP3 402 aa14.04□□□□□ -0.16
SNX10-204ENST00000409838 SPDYE6P0CI01 402 aa14.04□□□□□ -0.16
SNX10-204ENST00000409838 SPDYE2Q495Y8 402 aa14.04□□□□□ -0.16
SNX10-204ENST00000409838 ZNF692Q9BU19 519 aaPredicted RBP13.95□□□□□ -0.18
SNX10-204ENST00000409838 REM2Q8IYK8 340 aaPredicted RBP13.92□□□□□ -0.18
SNX10-204ENST00000409838 SSUH2Q9Y2M2 353 aa13.92□□□□□ -0.18
SNX10-204ENST00000409838 CHRDL2Q6WN34 429 aa13.81□□□□□ -0.2
SNX10-204ENST00000409838 PITPNM1O00562 1244 aa13.78□□□□□ -0.2
SNX10-204ENST00000409838 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
SNX10-204ENST00000409838 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
SNX10-204ENST00000409838 POTEHQ6S545 545 aa13.71□□□□□ -0.21
SNX10-204ENST00000409838 SPDYE1Q8NFV5 336 aaPredicted RBP13.69□□□□□ -0.22
SNX10-204ENST00000409838 CLEC11AQ9Y240 323 aa13.66□□□□□ -0.22
SNX10-204ENST00000409838 PIP4P2Q8N4L2 257 aa13.58□□□□□ -0.24
SNX10-204ENST00000409838 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNX10-204ENST00000409838 PROM2Q8N271 834 aa13.53□□□□□ -0.24
SNX10-204ENST00000409838 FKBP8Q14318 412 aa13.52□□□□□ -0.25
SNX10-204ENST00000409838 PRR29P0C7W0 189 aa13.49□□□□□ -0.25
SNX10-204ENST00000409838 STAG3Q9UJ98 1225 aa13.46□□□□□ -0.25
SNX10-204ENST00000409838 PRKAR2AP13861 404 aaKnown RBP13.42□□□□□ -0.26
SNX10-204ENST00000409838 CHADLQ6NUI6 762 aa13.37□□□□□ -0.27
SNX10-204ENST00000409838 CREBZFQ9NS37 354 aa13.27□□□□□ -0.29
SNX10-204ENST00000409838 HAX1O00165 279 aa13.21□□□□□ -0.29
SNX10-204ENST00000409838 FARP1Q9Y4F1 1045 aaPredicted RBP13.2□□□□□ -0.3
SNX10-204ENST00000409838 C19orf67A6NJJ6 358 aa13.12□□□□□ -0.31
SNX10-204ENST00000409838 MNX1P50219 401 aaPredicted RBP13.11□□□□□ -0.31
SNX10-204ENST00000409838 FBXO3Q9UK99 471 aa13.11□□□□□ -0.31
SNX10-204ENST00000409838 EVX2Q03828 476 aa13.1□□□□□ -0.31
SNX10-204ENST00000409838 MIER1Q8N108 512 aa13.09□□□□□ -0.31
SNX10-204ENST00000409838 SP7Q8TDD2 431 aaPredicted RBP13.05□□□□□ -0.32
SNX10-204ENST00000409838 PLEKHG5O94827 1062 aa13.03□□□□□ -0.32
SNX10-204ENST00000409838 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
SNX10-204ENST00000409838 NPM1P06748 294 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNX10-204ENST00000409838 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
SNX10-204ENST00000409838 VASPP50552 380 aaPredicted RBP12.94□□□□□ -0.34
SNX10-204ENST00000409838 ZBTB47Q9UFB7 747 aaPredicted RBP12.91□□□□□ -0.34
SNX10-204ENST00000409838 ZRANB1Q9UGI0 708 aa12.9□□□□□ -0.34
SNX10-204ENST00000409838 PAK3O75914 559 aaPredicted RBP12.86□□□□□ -0.35
SNX10-204ENST00000409838 GABBR2O75899 941 aa12.83□□□□□ -0.36
SNX10-204ENST00000409838 ZNF579Q8NAF0 562 aaKnown RBP12.83□□□□□ -0.36
SNX10-204ENST00000409838 RASEFQ8IZ41 740 aa12.81□□□□□ -0.36
SNX10-204ENST00000409838 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
SNX10-204ENST00000409838 NUBP1P53384 320 aa12.8□□□□□ -0.36
SNX10-204ENST00000409838 KLHL34Q8N239 644 aa12.78□□□□□ -0.36
SNX10-204ENST00000409838 IFNLR1Q8IU57 520 aaPredicted RBP12.77□□□□□ -0.37
SNX10-204ENST00000409838 CLCN6P51797 869 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms