RNA–Protein interactions for RNA: ENST00000462993.1

SNX10-208, Transcript of sorting nexin 10, humanhuman

TSL 1 (best)

Gene SNX10, Length 806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX10-208ENST00000462993 AEBP2Q6ZN18 517 aaPredicted RBP24.28■■□□□ 1.48
SNX10-208ENST00000462993 CHIC1Q5VXU3 224 aa22.82■■□□□ 1.24
SNX10-208ENST00000462993 SENP3Q9H4L4 574 aaPredicted RBP20.71■□□□□ 0.91
SNX10-208ENST00000462993 PHF23Q9BUL5 403 aaPredicted RBP20.46■□□□□ 0.87
SNX10-208ENST00000462993 FOXD1Q16676 465 aa19.37■□□□□ 0.69
SNX10-208ENST00000462993 MSH5O43196 834 aa18.15■□□□□ 0.5
SNX10-208ENST00000462993 PLPPR3Q6T4P5 718 aa18.15■□□□□ 0.5
SNX10-208ENST00000462993 POTEDQ86YR6 584 aa18.11■□□□□ 0.49
SNX10-208ENST00000462993 PIAS4Q8N2W9 510 aaPredicted RBP18.07■□□□□ 0.48
SNX10-208ENST00000462993 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
SNX10-208ENST00000462993 ADRA2BP18089 450 aa17.93■□□□□ 0.46
SNX10-208ENST00000462993 MAPK8IP2Q13387 824 aaPredicted RBP16.54■□□□□ 0.24
SNX10-208ENST00000462993 DMRT2Q9Y5R5 561 aa16.39■□□□□ 0.21
SNX10-208ENST00000462993 SCAF1Q9H7N4 1312 aaKnown RBP16.34■□□□□ 0.21
SNX10-208ENST00000462993 PPP4R3CPQ6ZMV5 832 aa15.92■□□□□ 0.14
SNX10-208ENST00000462993 DCAF8L1A6NGE4 600 aa15.87■□□□□ 0.13
SNX10-208ENST00000462993 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
SNX10-208ENST00000462993 HOXD11P31277 338 aaPredicted RBP15.68■□□□□ 0.1
SNX10-208ENST00000462993 CNKSR2Q8WXI2 1034 aa15.63■□□□□ 0.09
SNX10-208ENST00000462993 RNF216Q9NWF9 866 aaPredicted RBP15.52■□□□□ 0.08
SNX10-208ENST00000462993 RNF39Q9H2S5 420 aa15.47■□□□□ 0.07
SNX10-208ENST00000462993 C1QBPQ07021 282 aaKnown RBP15.23■□□□□ 0.03
SNX10-208ENST00000462993 NCBP3Q53F19 620 aaKnown RBP15.22■□□□□ 0.03
SNX10-208ENST00000462993 DNAJC5BQ9UF47 199 aa15.09■□□□□ 0.01
SNX10-208ENST00000462993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.04■□□□□ -0
SNX10-208ENST00000462993 NPM3O75607 178 aaKnown RBP15.02■□□□□ -0
SNX10-208ENST00000462993 U3KPZ7 1027 aaPredicted RBP14.65□□□□□ -0.06
SNX10-208ENST00000462993 KCNA4P22459 653 aa14.58□□□□□ -0.08
SNX10-208ENST00000462993 CAPN15O75808 1086 aa14.55□□□□□ -0.08
SNX10-208ENST00000462993 SPINK5Q9NQ38 1064 aaPredicted RBP14.55□□□□□ -0.08
SNX10-208ENST00000462993 DSG3P32926 999 aa14.45□□□□□ -0.1
SNX10-208ENST00000462993 SLC4A2P04920 1241 aa14.39□□□□□ -0.11
SNX10-208ENST00000462993 TRHP20396 242 aaPredicted RBP14.29□□□□□ -0.12
SNX10-208ENST00000462993 ABCB7O75027 752 aa14.22□□□□□ -0.13
SNX10-208ENST00000462993 APLP2Q06481 763 aa14.18□□□□□ -0.14
SNX10-208ENST00000462993 POTEHQ6S545 545 aa14.15□□□□□ -0.14
SNX10-208ENST00000462993 ZNF219Q9P2Y4 722 aaPredicted RBP14.15□□□□□ -0.14
SNX10-208ENST00000462993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
SNX10-208ENST00000462993 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
SNX10-208ENST00000462993 SAMD1Q6SPF0 538 aaPredicted RBP14.05□□□□□ -0.16
SNX10-208ENST00000462993 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
SNX10-208ENST00000462993 POLA2Q14181 598 aa13.82□□□□□ -0.2
SNX10-208ENST00000462993 RBM42Q9BTD8 480 aaKnown RBP13.77□□□□□ -0.21
SNX10-208ENST00000462993 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
SNX10-208ENST00000462993 FOXD4L1Q9NU39 408 aa13.63□□□□□ -0.23
SNX10-208ENST00000462993 ATF5Q9Y2D1 282 aaPredicted RBP13.63□□□□□ -0.23
SNX10-208ENST00000462993 CHRDL2Q6WN34 429 aa13.59□□□□□ -0.23
SNX10-208ENST00000462993 ZBTB12Q9Y330 459 aaPredicted RBP13.45□□□□□ -0.26
SNX10-208ENST00000462993 AKT1S1Q96B36 256 aa13.41□□□□□ -0.26
SNX10-208ENST00000462993 ZBTB22O15209 634 aa13.39□□□□□ -0.27
SNX10-208ENST00000462993 OSCARQ8IYS5 282 aa13.39□□□□□ -0.27
SNX10-208ENST00000462993 REM2Q8IYK8 340 aaPredicted RBP13.33□□□□□ -0.28
SNX10-208ENST00000462993 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
SNX10-208ENST00000462993 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
SNX10-208ENST00000462993 ATXN8OSP0DMR3 200 aa13.17□□□□□ -0.3
SNX10-208ENST00000462993 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
SNX10-208ENST00000462993 HAX1O00165 279 aa13.09□□□□□ -0.31
SNX10-208ENST00000462993 FBLN2P98095 1184 aa13.09□□□□□ -0.31
SNX10-208ENST00000462993 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.32
SNX10-208ENST00000462993 SPDYE2BA6NHP3 402 aa13.03□□□□□ -0.32
SNX10-208ENST00000462993 SPDYE6P0CI01 402 aa13.03□□□□□ -0.32
SNX10-208ENST00000462993 SPDYE2Q495Y8 402 aa13.03□□□□□ -0.32
SNX10-208ENST00000462993 MKRN4PQ13434 485 aaPredicted RBP12.96□□□□□ -0.33
SNX10-208ENST00000462993 CLEC11AQ9Y240 323 aa12.95□□□□□ -0.34
SNX10-208ENST00000462993 EVX2Q03828 476 aa12.9□□□□□ -0.34
SNX10-208ENST00000462993 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
SNX10-208ENST00000462993 PRKAR2AP13861 404 aaKnown RBP12.87□□□□□ -0.35
SNX10-208ENST00000462993 SPDYE1Q8NFV5 336 aaPredicted RBP12.87□□□□□ -0.35
SNX10-208ENST00000462993 SSUH2Q9Y2M2 353 aa12.82□□□□□ -0.36
SNX10-208ENST00000462993 CHADLQ6NUI6 762 aa12.71□□□□□ -0.37
SNX10-208ENST00000462993 PABPN1Q86U42 306 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNX10-208ENST00000462993 EHMT2Q96KQ7 1210 aa12.7□□□□□ -0.38
SNX10-208ENST00000462993 C19orf67A6NJJ6 358 aa12.66□□□□□ -0.38
SNX10-208ENST00000462993 PRR29P0C7W0 189 aa12.66□□□□□ -0.38
SNX10-208ENST00000462993 CSRNP3Q8WYN3 585 aa12.6□□□□□ -0.39
SNX10-208ENST00000462993 GABBR2O75899 941 aa12.56□□□□□ -0.4
SNX10-208ENST00000462993 FARP1Q9Y4F1 1045 aaPredicted RBP12.45□□□□□ -0.42
SNX10-208ENST00000462993 CD44P16070 742 aaKnown RBP12.44□□□□□ -0.42
SNX10-208ENST00000462993 LHX8Q68G74 356 aa12.37□□□□□ -0.43
SNX10-208ENST00000462993 POTEIP0CG38 1075 aa12.29□□□□□ -0.44
SNX10-208ENST00000462993 CREBZFQ9NS37 354 aa12.27□□□□□ -0.45
SNX10-208ENST00000462993 SPDYE4A6NLX3 237 aa12.26□□□□□ -0.45
SNX10-208ENST00000462993 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
SNX10-208ENST00000462993 STAG3Q9UJ98 1225 aa12.25□□□□□ -0.45
SNX10-208ENST00000462993 DCBLD2Q96PD2 775 aa12.22□□□□□ -0.45
SNX10-208ENST00000462993 CLCN6P51797 869 aa12.18□□□□□ -0.46
SNX10-208ENST00000462993 ZNF579Q8NAF0 562 aaKnown RBP12.18□□□□□ -0.46
SNX10-208ENST00000462993 GALR2O43603 387 aaPredicted RBP12.11□□□□□ -0.47
SNX10-208ENST00000462993 PAK3O75914 559 aaPredicted RBP12.08□□□□□ -0.48
SNX10-208ENST00000462993 PHF12Q96QT6 1004 aa12.07□□□□□ -0.48
SNX10-208ENST00000462993 NPM1P06748 294 aaKnown RBP eCLIP12.03□□□□□ -0.48
SNX10-208ENST00000462993 MNX1P50219 401 aaPredicted RBP12□□□□□ -0.49
SNX10-208ENST00000462993 POTEB2H3BUK9 544 aa11.9□□□□□ -0.5
SNX10-208ENST00000462993 PELP1Q8IZL8 1130 aaKnown RBP11.9□□□□□ -0.5
SNX10-208ENST00000462993 TSPYL2Q9H2G4 693 aaPredicted RBP11.89□□□□□ -0.51
SNX10-208ENST00000462993 OTUD5Q96G74 571 aa11.88□□□□□ -0.51
SNX10-208ENST00000462993 MS4A3Q96HJ5 214 aa11.88□□□□□ -0.51
SNX10-208ENST00000462993 PROM2Q8N271 834 aa11.84□□□□□ -0.51
SNX10-208ENST00000462993 PLSCR2Q9NRY7 297 aa11.82□□□□□ -0.52
SNX10-208ENST00000462993 ATMINO43313 823 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 237.2 ms