RNA–Protein interactions for RNA: ENST00000238855.11

AFTPH-201, Transcript of aftiphilin, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene AFTPH, Length 4,113 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFTPH-201ENST00000238855 NISCHQ9Y2I1 1504 aa30.79■■■□□ 2.52
AFTPH-201ENST00000238855 DCAF8L2P0C7V8 631 aa27.92■■■□□ 2.06
AFTPH-201ENST00000238855 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
AFTPH-201ENST00000238855 SUPT5HO00267 1087 aaKnown RBP27.18■■□□□ 1.94
AFTPH-201ENST00000238855 PCGF6Q9BYE7 350 aa26.4■■□□□ 1.82
AFTPH-201ENST00000238855 HRCP23327 699 aa26.09■■□□□ 1.77
AFTPH-201ENST00000238855 PPARGC1BQ86YN6 1023 aaKnown RBP26.04■■□□□ 1.76
AFTPH-201ENST00000238855 PELP1Q8IZL8 1130 aaKnown RBP25.82■■□□□ 1.72
AFTPH-201ENST00000238855 ZCCHC6Q5VYS8 1495 aaKnown RBP25.78■■□□□ 1.72
AFTPH-201ENST00000238855 CCDC180Q9P1Z9 1646 aa25.65■■□□□ 1.7
AFTPH-201ENST00000238855 EHMT2Q96KQ7 1210 aa25.61■■□□□ 1.69
AFTPH-201ENST00000238855 ABCC9O60706 1549 aa25.49■■□□□ 1.67
AFTPH-201ENST00000238855 CHIC1Q5VXU3 224 aa25.43■■□□□ 1.66
AFTPH-201ENST00000238855 FAM9AQ8IZU1 332 aaPredicted RBP25.36■■□□□ 1.65
AFTPH-201ENST00000238855 LOC105371045A0A1W2PR82 267 aa25.12■■□□□ 1.61
AFTPH-201ENST00000238855 TRIM41Q8WV44 630 aa25.1■■□□□ 1.61
AFTPH-201ENST00000238855 SCRIBQ14160 1630 aa24.98■■□□□ 1.59
AFTPH-201ENST00000238855 MYT1Q01538 1121 aa24.95■■□□□ 1.58
AFTPH-201ENST00000238855 ZEB1P37275 1124 aaPredicted RBP24.94■■□□□ 1.58
AFTPH-201ENST00000238855 TRIM26Q12899 539 aaPredicted RBP24.91■■□□□ 1.58
AFTPH-201ENST00000238855 CENPBP07199 599 aaPredicted RBP24.86■■□□□ 1.57
AFTPH-201ENST00000238855 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.56
AFTPH-201ENST00000238855 TTBK1Q5TCY1 1321 aaPredicted RBP24.81■■□□□ 1.56
AFTPH-201ENST00000238855 YTHDC1Q96MU7 727 aaKnown RBP24.78■■□□□ 1.56
AFTPH-201ENST00000238855 SCAF1Q9H7N4 1312 aaKnown RBP24.77■■□□□ 1.56
AFTPH-201ENST00000238855 CCER1Q8TC90 406 aaPredicted RBP24.69■■□□□ 1.54
AFTPH-201ENST00000238855 DCAF1Q9Y4B6 1507 aa24.68■■□□□ 1.54
AFTPH-201ENST00000238855 MYO15BQ96JP2 1530 aa24.68■■□□□ 1.54
AFTPH-201ENST00000238855 GTF3C3Q9Y5Q9 886 aa24.59■■□□□ 1.53
AFTPH-201ENST00000238855 RSF1Q96T23 1441 aaPredicted RBP24.51■■□□□ 1.51
AFTPH-201ENST00000238855 RANGAP1P46060 587 aaPredicted RBP24.38■■□□□ 1.49
AFTPH-201ENST00000238855 ACIN1Q9UKV3 1341 aaKnown RBP24.37■■□□□ 1.49
AFTPH-201ENST00000238855 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
AFTPH-201ENST00000238855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.35■■□□□ 1.49
AFTPH-201ENST00000238855 NEUROD1Q13562 356 aa24.3■■□□□ 1.48
AFTPH-201ENST00000238855 NACADO15069 1562 aa24.27■■□□□ 1.48
AFTPH-201ENST00000238855 DIEXFQ68CQ4 756 aaKnown RBP24.27■■□□□ 1.48
AFTPH-201ENST00000238855 UBTFP17480 764 aaKnown RBP24.26■■□□□ 1.47
AFTPH-201ENST00000238855 RB1CC1Q8TDY2 1594 aa24.14■■□□□ 1.46
AFTPH-201ENST00000238855 MROH2BQ7Z745 1585 aa24.06■■□□□ 1.44
AFTPH-201ENST00000238855 APLP2Q06481 763 aa23.9■■□□□ 1.42
AFTPH-201ENST00000238855 WIZO95785 1651 aa23.81■■□□□ 1.4
AFTPH-201ENST00000238855 BAZ1AQ9NRL2 1556 aaPredicted RBP23.75■■□□□ 1.39
AFTPH-201ENST00000238855 CSRNP3Q8WYN3 585 aa23.69■■□□□ 1.38
AFTPH-201ENST00000238855 ERICH6Q7L0X2 663 aa23.67■■□□□ 1.38
AFTPH-201ENST00000238855 HNRNPUL2Q1KMD3 747 aaKnown RBP23.61■■□□□ 1.37
AFTPH-201ENST00000238855 BCANQ96GW7 911 aa23.59■■□□□ 1.37
AFTPH-201ENST00000238855 ATP1B4Q9UN42 357 aaPredicted RBP23.56■■□□□ 1.36
AFTPH-201ENST00000238855 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
AFTPH-201ENST00000238855 ZNF316A6NFI3 1004 aaPredicted RBP23.53■■□□□ 1.36
AFTPH-201ENST00000238855 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
AFTPH-201ENST00000238855 SOGA1O94964 1423 aa23.43■■□□□ 1.34
AFTPH-201ENST00000238855 NEFLP07196 543 aa23.41■■□□□ 1.34
AFTPH-201ENST00000238855 BAZ1BQ9UIG0 1483 aaKnown RBP23.38■■□□□ 1.33
AFTPH-201ENST00000238855 MIER1Q8N108 512 aa23.38■■□□□ 1.33
AFTPH-201ENST00000238855 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
AFTPH-201ENST00000238855 WRNQ14191 1432 aaPredicted RBP eCLIP23.34■■□□□ 1.33
AFTPH-201ENST00000238855 ITGAEP38570 1179 aa23.34■■□□□ 1.33
AFTPH-201ENST00000238855 TOP2AP11388 1531 aaKnown RBP23.33■■□□□ 1.33
AFTPH-201ENST00000238855 BCL11AQ9H165 835 aa23.24■■□□□ 1.31
AFTPH-201ENST00000238855 CEP162Q5TB80 1403 aa23.23■■□□□ 1.31
AFTPH-201ENST00000238855 RUSC2Q8N2Y8 1516 aa23.18■■□□□ 1.3
AFTPH-201ENST00000238855 SMARCA2P51531 1590 aa23.15■■□□□ 1.3
AFTPH-201ENST00000238855 ATAD2BQ9ULI0 1458 aa23.15■■□□□ 1.3
AFTPH-201ENST00000238855 P3H3Q8IVL6 736 aa23.13■■□□□ 1.29
AFTPH-201ENST00000238855 ANP32EQ9BTT0 268 aa23.13■■□□□ 1.29
AFTPH-201ENST00000238855 TNIKQ9UKE5 1360 aa23.06■■□□□ 1.28
AFTPH-201ENST00000238855 GOLGA3Q08378 1498 aa23.03■■□□□ 1.28
AFTPH-201ENST00000238855 CLIP1P30622 1438 aa23.03■■□□□ 1.28
AFTPH-201ENST00000238855 BICRAQ9NZM4 1560 aa23.01■■□□□ 1.27
AFTPH-201ENST00000238855 EEA1Q15075 1411 aa23.01■■□□□ 1.27
AFTPH-201ENST00000238855 FKBP8Q14318 412 aa22.98■■□□□ 1.27
AFTPH-201ENST00000238855 UNC13AQ9UPW8 1703 aa22.95■■□□□ 1.26
AFTPH-201ENST00000238855 SUPT16HQ9Y5B9 1047 aaKnown RBP22.92■■□□□ 1.26
AFTPH-201ENST00000238855 CEP164Q9UPV0 1460 aa22.89■■□□□ 1.25
AFTPH-201ENST00000238855 FAM50AQ14320 339 aaKnown RBP22.87■■□□□ 1.25
AFTPH-201ENST00000238855 ARID3CA6NKF2 412 aa22.77■■□□□ 1.24
AFTPH-201ENST00000238855 RAPGEF2Q9Y4G8 1499 aa22.77■■□□□ 1.24
AFTPH-201ENST00000238855 TSHZ2Q9NRE2 1034 aa22.76■■□□□ 1.23
AFTPH-201ENST00000238855 KIF27Q86VH2 1401 aa22.75■■□□□ 1.23
AFTPH-201ENST00000238855 SYNJ1O43426 1573 aa22.69■■□□□ 1.22
AFTPH-201ENST00000238855 CNGB1Q14028 1251 aaPredicted RBP22.68■■□□□ 1.22
AFTPH-201ENST00000238855 EIF4G1Q04637 1599 aaKnown RBP22.68■■□□□ 1.22
AFTPH-201ENST00000238855 TRIM52Q96A61 297 aa22.67■■□□□ 1.22
AFTPH-201ENST00000238855 CLSPNQ9HAW4 1339 aa22.66■■□□□ 1.22
AFTPH-201ENST00000238855 CUX2O14529 1486 aa22.66■■□□□ 1.22
AFTPH-201ENST00000238855 CDK11AQ9UQ88 783 aaPredicted RBP22.66■■□□□ 1.22
AFTPH-201ENST00000238855 KANK4Q5T7N3 995 aaPredicted RBP22.64■■□□□ 1.21
AFTPH-201ENST00000238855 NCAPD3P42695 1498 aa22.6■■□□□ 1.21
AFTPH-201ENST00000238855 FBLN2P98095 1184 aa22.6■■□□□ 1.21
AFTPH-201ENST00000238855 RTL5Q5HYW3 569 aaPredicted RBP22.59■■□□□ 1.21
AFTPH-201ENST00000238855 IRX6P78412 446 aaPredicted RBP22.59■■□□□ 1.21
AFTPH-201ENST00000238855 CADPSQ9ULU8 1353 aa22.59■■□□□ 1.21
AFTPH-201ENST00000238855 VPS8Q8N3P4 1428 aa22.58■■□□□ 1.21
AFTPH-201ENST00000238855 NBR1Q14596 966 aa22.58■■□□□ 1.2
AFTPH-201ENST00000238855 DDX10Q13206 875 aaKnown RBP22.57■■□□□ 1.2
AFTPH-201ENST00000238855 CARMIL1Q5VZK9 1371 aa22.53■■□□□ 1.2
AFTPH-201ENST00000238855 RBM19Q9Y4C8 960 aaKnown RBP22.49■■□□□ 1.19
AFTPH-201ENST00000238855 HIRIP3Q9BW71 556 aaPredicted RBP22.46■■□□□ 1.19
AFTPH-201ENST00000238855 ANP32CO43423 234 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms