RNA–Protein interactions for RNA: ENST00000536727.5

CADM1-204, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CADM1, Length 3,520 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-204ENST00000536727 NISCHQ9Y2I1 1504 aa25.13■■□□□ 1.61
CADM1-204ENST00000536727 SHROOM4Q9ULL8 1493 aa22.88■■□□□ 1.25
CADM1-204ENST00000536727 SUPT5HO00267 1087 aaKnown RBP22.82■■□□□ 1.24
CADM1-204ENST00000536727 HRCP23327 699 aa22.52■■□□□ 1.2
CADM1-204ENST00000536727 PCGF6Q9BYE7 350 aa22.43■■□□□ 1.18
CADM1-204ENST00000536727 PPARGC1BQ86YN6 1023 aaKnown RBP22.34■■□□□ 1.17
CADM1-204ENST00000536727 CHIC1Q5VXU3 224 aa22.04■■□□□ 1.12
CADM1-204ENST00000536727 MYO15BQ96JP2 1530 aa21.99■■□□□ 1.11
CADM1-204ENST00000536727 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
CADM1-204ENST00000536727 LOC105371045A0A1W2PR82 267 aa21.76■■□□□ 1.07
CADM1-204ENST00000536727 TRIM26Q12899 539 aaPredicted RBP21.49■■□□□ 1.03
CADM1-204ENST00000536727 PELP1Q8IZL8 1130 aaKnown RBP21.48■■□□□ 1.03
CADM1-204ENST00000536727 EHMT2Q96KQ7 1210 aa21.36■■□□□ 1.01
CADM1-204ENST00000536727 DCAF1Q9Y4B6 1507 aa21.33■■□□□ 1.01
CADM1-204ENST00000536727 SCAF1Q9H7N4 1312 aaKnown RBP21.3■■□□□ 1
CADM1-204ENST00000536727 ZCCHC6Q5VYS8 1495 aaKnown RBP21.28■■□□□ 1
CADM1-204ENST00000536727 ZEB1P37275 1124 aaPredicted RBP21.23■□□□□ 0.99
CADM1-204ENST00000536727 FAM9AQ8IZU1 332 aaPredicted RBP21.22■□□□□ 0.99
CADM1-204ENST00000536727 CCDC180Q9P1Z9 1646 aa20.99■□□□□ 0.95
CADM1-204ENST00000536727 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
CADM1-204ENST00000536727 NEUROD1Q13562 356 aa20.84■□□□□ 0.93
CADM1-204ENST00000536727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.83■□□□□ 0.93
CADM1-204ENST00000536727 CCER1Q8TC90 406 aaPredicted RBP20.82■□□□□ 0.92
CADM1-204ENST00000536727 ACIN1Q9UKV3 1341 aaKnown RBP20.82■□□□□ 0.92
CADM1-204ENST00000536727 GTF3C3Q9Y5Q9 886 aa20.79■□□□□ 0.92
CADM1-204ENST00000536727 TTBK1Q5TCY1 1321 aaPredicted RBP20.78■□□□□ 0.92
CADM1-204ENST00000536727 CENPBP07199 599 aaPredicted RBP20.71■□□□□ 0.91
CADM1-204ENST00000536727 DIEXFQ68CQ4 756 aaKnown RBP20.65■□□□□ 0.9
CADM1-204ENST00000536727 YTHDC1Q96MU7 727 aaKnown RBP20.61■□□□□ 0.89
CADM1-204ENST00000536727 MYT1Q01538 1121 aa20.55■□□□□ 0.88
CADM1-204ENST00000536727 RSF1Q96T23 1441 aaPredicted RBP20.31■□□□□ 0.84
CADM1-204ENST00000536727 RB1CC1Q8TDY2 1594 aa20.2■□□□□ 0.82
CADM1-204ENST00000536727 ZNF316A6NFI3 1004 aaPredicted RBP20.19■□□□□ 0.82
CADM1-204ENST00000536727 ABCC9O60706 1549 aa20.17■□□□□ 0.82
CADM1-204ENST00000536727 SCRIBQ14160 1630 aa20.13■□□□□ 0.81
CADM1-204ENST00000536727 MIER1Q8N108 512 aa20.11■□□□□ 0.81
CADM1-204ENST00000536727 HNRNPUL2Q1KMD3 747 aaKnown RBP20.07■□□□□ 0.8
CADM1-204ENST00000536727 UBTFP17480 764 aaKnown RBP20.04■□□□□ 0.8
CADM1-204ENST00000536727 RANGAP1P46060 587 aaPredicted RBP19.88■□□□□ 0.77
CADM1-204ENST00000536727 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
CADM1-204ENST00000536727 CEP162Q5TB80 1403 aa19.82■□□□□ 0.76
CADM1-204ENST00000536727 APLP2Q06481 763 aa19.74■□□□□ 0.75
CADM1-204ENST00000536727 MROH2BQ7Z745 1585 aa19.73■□□□□ 0.75
CADM1-204ENST00000536727 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
CADM1-204ENST00000536727 SUPT16HQ9Y5B9 1047 aaKnown RBP19.68■□□□□ 0.74
CADM1-204ENST00000536727 BCANQ96GW7 911 aa19.67■□□□□ 0.74
CADM1-204ENST00000536727 SOGA1O94964 1423 aa19.65■□□□□ 0.74
CADM1-204ENST00000536727 CCDC88BA6NC98 1476 aa19.65■□□□□ 0.74
CADM1-204ENST00000536727 WIZO95785 1651 aa19.64■□□□□ 0.74
CADM1-204ENST00000536727 ABCC8Q09428 1581 aa19.64■□□□□ 0.73
CADM1-204ENST00000536727 WRNQ14191 1432 aaPredicted RBP eCLIP19.63■□□□□ 0.73
CADM1-204ENST00000536727 TNIKQ9UKE5 1360 aa19.59■□□□□ 0.73
CADM1-204ENST00000536727 TSHZ2Q9NRE2 1034 aa19.55■□□□□ 0.72
CADM1-204ENST00000536727 ANP32EQ9BTT0 268 aa19.54■□□□□ 0.72
CADM1-204ENST00000536727 RUSC2Q8N2Y8 1516 aa19.51■□□□□ 0.71
CADM1-204ENST00000536727 BCL11AQ9H165 835 aa19.46■□□□□ 0.71
CADM1-204ENST00000536727 ITGAEP38570 1179 aa19.44■□□□□ 0.7
CADM1-204ENST00000536727 CLSPNQ9HAW4 1339 aa19.4■□□□□ 0.7
CADM1-204ENST00000536727 KCNH8Q96L42 1107 aa19.39■□□□□ 0.7
CADM1-204ENST00000536727 FKBP8Q14318 412 aa19.39■□□□□ 0.69
CADM1-204ENST00000536727 GOLGA3Q08378 1498 aa19.38■□□□□ 0.69
CADM1-204ENST00000536727 CLIP1P30622 1438 aa19.36■□□□□ 0.69
CADM1-204ENST00000536727 NACADO15069 1562 aa19.33■□□□□ 0.69
CADM1-204ENST00000536727 BAZ1AQ9NRL2 1556 aaPredicted RBP19.31■□□□□ 0.68
CADM1-204ENST00000536727 NEFLP07196 543 aa19.3■□□□□ 0.68
CADM1-204ENST00000536727 EEA1Q15075 1411 aa19.28■□□□□ 0.68
CADM1-204ENST00000536727 DDX10Q13206 875 aaKnown RBP19.23■□□□□ 0.67
CADM1-204ENST00000536727 EIF4G1Q04637 1599 aaKnown RBP19.22■□□□□ 0.67
CADM1-204ENST00000536727 DHX57Q6P158 1386 aaKnown RBP19.21■□□□□ 0.67
CADM1-204ENST00000536727 TRIM52Q96A61 297 aa19.2■□□□□ 0.66
CADM1-204ENST00000536727 VPS8Q8N3P4 1428 aa19.19■□□□□ 0.66
CADM1-204ENST00000536727 HIRIP3Q9BW71 556 aaPredicted RBP19.17■□□□□ 0.66
CADM1-204ENST00000536727 RBM19Q9Y4C8 960 aaKnown RBP19.17■□□□□ 0.66
CADM1-204ENST00000536727 CEP164Q9UPV0 1460 aa19.16■□□□□ 0.66
CADM1-204ENST00000536727 ERICH6Q7L0X2 663 aa19.14■□□□□ 0.65
CADM1-204ENST00000536727 TOP2AP11388 1531 aaKnown RBP19.14■□□□□ 0.65
CADM1-204ENST00000536727 KANK4Q5T7N3 995 aaPredicted RBP19.14■□□□□ 0.65
CADM1-204ENST00000536727 SMARCA2P51531 1590 aa19.11■□□□□ 0.65
CADM1-204ENST00000536727 PABPN1Q86U42 306 aaKnown RBP eCLIP19.08■□□□□ 0.65
CADM1-204ENST00000536727 RAPGEF2Q9Y4G8 1499 aa19.06■□□□□ 0.64
CADM1-204ENST00000536727 IRX6P78412 446 aaPredicted RBP19.04■□□□□ 0.64
CADM1-204ENST00000536727 SIN3AQ96ST3 1273 aa19■□□□□ 0.63
CADM1-204ENST00000536727 ANP32CO43423 234 aa18.97■□□□□ 0.63
CADM1-204ENST00000536727 ATP1B4Q9UN42 357 aaPredicted RBP18.97■□□□□ 0.63
CADM1-204ENST00000536727 SMARCA4P51532 1647 aa18.95■□□□□ 0.62
CADM1-204ENST00000536727 FAM50AQ14320 339 aaKnown RBP18.95■□□□□ 0.62
CADM1-204ENST00000536727 KIF21BO75037 1637 aa18.94■□□□□ 0.62
CADM1-204ENST00000536727 MSH5O43196 834 aa18.9■□□□□ 0.62
CADM1-204ENST00000536727 CDK11AQ9UQ88 783 aaPredicted RBP18.9■□□□□ 0.62
CADM1-204ENST00000536727 SYNJ1O43426 1573 aa18.88■□□□□ 0.61
CADM1-204ENST00000536727 CCNB3Q8WWL7 1395 aa18.88■□□□□ 0.61
CADM1-204ENST00000536727 RAB3GAP2Q9H2M9 1393 aa18.86■□□□□ 0.61
CADM1-204ENST00000536727 HNRNPUQ00839 825 aaKnown RBP eCLIP18.86■□□□□ 0.61
CADM1-204ENST00000536727 BAZ1BQ9UIG0 1483 aaKnown RBP18.82■□□□□ 0.6
CADM1-204ENST00000536727 PPP1R15AO75807 674 aaPredicted RBP18.76■□□□□ 0.59
CADM1-204ENST00000536727 P3H3Q8IVL6 736 aa18.74■□□□□ 0.59
CADM1-204ENST00000536727 ARAP1Q96P48 1450 aa18.73■□□□□ 0.59
CADM1-204ENST00000536727 NBR1Q14596 966 aa18.72■□□□□ 0.59
CADM1-204ENST00000536727 CCER2I3L3R5 266 aa18.72■□□□□ 0.59
CADM1-204ENST00000536727 RRBP1Q9P2E9 1410 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms