Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
EMP3P54852 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
EMP3P54852 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
EMP3P54852 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
EMP3P54852 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.58■■□□□ 1.05
EMP3P54852 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.58■■□□□ 1.04
EMP3P54852 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
EMP3P54852 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
EMP3P54852 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
EMP3P54852 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EMP3P54852 EP400NL-214ENST00000641289 2402 ntBASIC21.57■■□□□ 1.04
EMP3P54852 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.57■■□□□ 1.04
EMP3P54852 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
EMP3P54852 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
EMP3P54852 AL136116.3-201ENST00000402907 1138 ntBASIC21.57■■□□□ 1.04
EMP3P54852 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
EMP3P54852 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
EMP3P54852 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EMP3P54852 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
EMP3P54852 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EMP3P54852 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.56■■□□□ 1.04
EMP3P54852 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.56■■□□□ 1.04
EMP3P54852 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
EMP3P54852 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
EMP3P54852 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.56■■□□□ 1.04
EMP3P54852 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EMP3P54852 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EMP3P54852 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EMP3P54852 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EMP3P54852 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
EMP3P54852 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
EMP3P54852 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EMP3P54852 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.55■■□□□ 1.04
EMP3P54852 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
EMP3P54852 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
EMP3P54852 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.55■■□□□ 1.04
EMP3P54852 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
EMP3P54852 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.55■■□□□ 1.04
EMP3P54852 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
EMP3P54852 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
EMP3P54852 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
EMP3P54852 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.54■■□□□ 1.04
EMP3P54852 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.54■■□□□ 1.04
EMP3P54852 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.54■■□□□ 1.04
EMP3P54852 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
EMP3P54852 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
EMP3P54852 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.53■■□□□ 1.04
EMP3P54852 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
EMP3P54852 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
EMP3P54852 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.53■■□□□ 1.04
EMP3P54852 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.53■■□□□ 1.04
EMP3P54852 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.53■■□□□ 1.04
EMP3P54852 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
EMP3P54852 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.53■■□□□ 1.04
EMP3P54852 SRD5A1P1-201ENST00000442297 786 ntBASIC21.53■■□□□ 1.04
EMP3P54852 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.53■■□□□ 1.04
EMP3P54852 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
EMP3P54852 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
EMP3P54852 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
EMP3P54852 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
EMP3P54852 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
EMP3P54852 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
EMP3P54852 AC009102.2-201ENST00000606772 1639 ntBASIC21.52■■□□□ 1.04
EMP3P54852 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
EMP3P54852 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.52■■□□□ 1.04
EMP3P54852 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
EMP3P54852 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.52■■□□□ 1.04
EMP3P54852 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.52■■□□□ 1.04
EMP3P54852 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.52■■□□□ 1.04
EMP3P54852 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
EMP3P54852 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
EMP3P54852 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
EMP3P54852 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
EMP3P54852 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.51■■□□□ 1.03
EMP3P54852 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.51■■□□□ 1.03
EMP3P54852 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
EMP3P54852 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
EMP3P54852 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
EMP3P54852 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.51■■□□□ 1.03
EMP3P54852 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
EMP3P54852 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
EMP3P54852 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
EMP3P54852 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
EMP3P54852 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.5■■□□□ 1.03
EMP3P54852 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EMP3P54852 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.5■■□□□ 1.03
EMP3P54852 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.5■■□□□ 1.03
EMP3P54852 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.5■■□□□ 1.03
EMP3P54852 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
EMP3P54852 AC092171.4-201ENST00000609130 632 ntBASIC21.5■■□□□ 1.03
EMP3P54852 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.5■■□□□ 1.03
EMP3P54852 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EMP3P54852 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
EMP3P54852 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.5■■□□□ 1.03
EMP3P54852 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
EMP3P54852 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.5■■□□□ 1.03
EMP3P54852 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EMP3P54852 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
EMP3P54852 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
EMP3P54852 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms