Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.48■■□□□ 1.67
SPDYE3A6NKU9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPDYE3A6NKU9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.48■■□□□ 1.67
SPDYE3A6NKU9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SPDYE3A6NKU9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SPDYE3A6NKU9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.47■■□□□ 1.67
SPDYE3A6NKU9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SPDYE3A6NKU9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SPDYE3A6NKU9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.47■■□□□ 1.67
SPDYE3A6NKU9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SPDYE3A6NKU9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.47■■□□□ 1.67
SPDYE3A6NKU9 AL499627.2-201ENST00000606283 725 ntBASIC25.47■■□□□ 1.67
SPDYE3A6NKU9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
SPDYE3A6NKU9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SPDYE3A6NKU9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.47■■□□□ 1.67
SPDYE3A6NKU9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SPDYE3A6NKU9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SPDYE3A6NKU9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
SPDYE3A6NKU9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SPDYE3A6NKU9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.46■■□□□ 1.67
SPDYE3A6NKU9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.46■■□□□ 1.67
SPDYE3A6NKU9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SPDYE3A6NKU9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.46■■□□□ 1.67
SPDYE3A6NKU9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.46■■□□□ 1.67
SPDYE3A6NKU9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SPDYE3A6NKU9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SPDYE3A6NKU9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
SPDYE3A6NKU9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.46■■□□□ 1.67
SPDYE3A6NKU9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SPDYE3A6NKU9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
SPDYE3A6NKU9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
SPDYE3A6NKU9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SPDYE3A6NKU9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.45■■□□□ 1.66
SPDYE3A6NKU9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SPDYE3A6NKU9 SUDS3P1-201ENST00000505831 966 ntBASIC25.45■■□□□ 1.66
SPDYE3A6NKU9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.45■■□□□ 1.66
SPDYE3A6NKU9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.45■■□□□ 1.66
SPDYE3A6NKU9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
SPDYE3A6NKU9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SPDYE3A6NKU9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SPDYE3A6NKU9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.45■■□□□ 1.66
SPDYE3A6NKU9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SPDYE3A6NKU9 AC133637.1-201ENST00000624115 1537 ntBASIC25.44■■□□□ 1.66
SPDYE3A6NKU9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SPDYE3A6NKU9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SPDYE3A6NKU9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.44■■□□□ 1.66
SPDYE3A6NKU9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SPDYE3A6NKU9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.44■■□□□ 1.66
SPDYE3A6NKU9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SPDYE3A6NKU9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SPDYE3A6NKU9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SPDYE3A6NKU9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.44■■□□□ 1.66
SPDYE3A6NKU9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
SPDYE3A6NKU9 AL353803.4-201ENST00000565882 1934 ntBASIC25.43■■□□□ 1.66
SPDYE3A6NKU9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.43■■□□□ 1.66
SPDYE3A6NKU9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
SPDYE3A6NKU9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SPDYE3A6NKU9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.43■■□□□ 1.66
SPDYE3A6NKU9 AF213884.3-201ENST00000563833 479 ntBASIC25.43■■□□□ 1.66
SPDYE3A6NKU9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.43■■□□□ 1.66
SPDYE3A6NKU9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SPDYE3A6NKU9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SPDYE3A6NKU9 ANOS2P-203ENST00000472227 1816 ntBASIC25.42■■□□□ 1.66
SPDYE3A6NKU9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SPDYE3A6NKU9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SPDYE3A6NKU9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SPDYE3A6NKU9 AP001330.3-201ENST00000520123 633 ntBASIC25.42■■□□□ 1.66
SPDYE3A6NKU9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.41■■□□□ 1.66
SPDYE3A6NKU9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SPDYE3A6NKU9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SPDYE3A6NKU9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SPDYE3A6NKU9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.41■■□□□ 1.66
SPDYE3A6NKU9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SPDYE3A6NKU9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.41■■□□□ 1.66
SPDYE3A6NKU9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
SPDYE3A6NKU9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
SPDYE3A6NKU9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
SPDYE3A6NKU9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
SPDYE3A6NKU9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SPDYE3A6NKU9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SPDYE3A6NKU9 MIR939-201ENST00000401314 82 ntBASIC25.4■■□□□ 1.66
SPDYE3A6NKU9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
SPDYE3A6NKU9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.4■■□□□ 1.66
SPDYE3A6NKU9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SPDYE3A6NKU9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SPDYE3A6NKU9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SPDYE3A6NKU9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
SPDYE3A6NKU9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SPDYE3A6NKU9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.4■■□□□ 1.66
SPDYE3A6NKU9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
SPDYE3A6NKU9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
SPDYE3A6NKU9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.39■■□□□ 1.66
SPDYE3A6NKU9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
SPDYE3A6NKU9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.39■■□□□ 1.66
SPDYE3A6NKU9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.39■■□□□ 1.66
SPDYE3A6NKU9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.39■■□□□ 1.66
SPDYE3A6NKU9 AL136967.2-201ENST00000623968 743 ntBASIC25.39■■□□□ 1.66
SPDYE3A6NKU9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SPDYE3A6NKU9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SPDYE3A6NKU9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms