Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KRTAP4-1Q9BYQ7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 HLA-L-209ENST00000420110 1011 ntBASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 AL354811.1-201ENST00000610286 706 ntBASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
KRTAP4-1Q9BYQ7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
KRTAP4-1Q9BYQ7 AC145676.1-201ENST00000514988 2004 ntBASIC11.77□□□□□ -0.52
KRTAP4-1Q9BYQ7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
KRTAP4-1Q9BYQ7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
KRTAP4-1Q9BYQ7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP4-1Q9BYQ7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
KRTAP4-1Q9BYQ7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC11.77□□□□□ -0.53
KRTAP4-1Q9BYQ7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC11.77□□□□□ -0.53
KRTAP4-1Q9BYQ7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC11.77□□□□□ -0.53
KRTAP4-1Q9BYQ7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
KRTAP4-1Q9BYQ7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC11.77□□□□□ -0.53
KRTAP4-1Q9BYQ7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC11.77□□□□□ -0.53
KRTAP4-1Q9BYQ7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC11.77□□□□□ -0.53
KRTAP4-1Q9BYQ7 AL499627.2-201ENST00000606283 725 ntBASIC11.77□□□□□ -0.53
KRTAP4-1Q9BYQ7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP4-1Q9BYQ7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP4-1Q9BYQ7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP4-1Q9BYQ7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP4-1Q9BYQ7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP4-1Q9BYQ7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
KRTAP4-1Q9BYQ7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC11.76□□□□□ -0.53
KRTAP4-1Q9BYQ7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP4-1Q9BYQ7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP4-1Q9BYQ7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
KRTAP4-1Q9BYQ7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
KRTAP4-1Q9BYQ7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP4-1Q9BYQ7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC11.76□□□□□ -0.53
KRTAP4-1Q9BYQ7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP4-1Q9BYQ7 RAP2CP1-201ENST00000605103 478 ntBASIC11.76□□□□□ -0.53
KRTAP4-1Q9BYQ7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP4-1Q9BYQ7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC11.76□□□□□ -0.53
KRTAP4-1Q9BYQ7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
KRTAP4-1Q9BYQ7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC11.76□□□□□ -0.53
KRTAP4-1Q9BYQ7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP4-1Q9BYQ7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
KRTAP4-1Q9BYQ7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC11.75□□□□□ -0.53
KRTAP4-1Q9BYQ7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP4-1Q9BYQ7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP4-1Q9BYQ7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC11.75□□□□□ -0.53
KRTAP4-1Q9BYQ7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP4-1Q9BYQ7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP4-1Q9BYQ7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP4-1Q9BYQ7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP4-1Q9BYQ7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
KRTAP4-1Q9BYQ7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP4-1Q9BYQ7 NT5C3AP1-201ENST00000394500 1012 ntBASIC11.75□□□□□ -0.53
KRTAP4-1Q9BYQ7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms