Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH15Q96QU1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH15Q96QU1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PCDH15Q96QU1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDH15Q96QU1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDH15Q96QU1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.1■■□□□ 1.13
PCDH15Q96QU1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDH15Q96QU1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDH15Q96QU1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.1■■□□□ 1.13
PCDH15Q96QU1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH15Q96QU1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH15Q96QU1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH15Q96QU1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH15Q96QU1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.09■■□□□ 1.13
PCDH15Q96QU1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.09■■□□□ 1.13
PCDH15Q96QU1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH15Q96QU1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH15Q96QU1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH15Q96QU1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH15Q96QU1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.08■■□□□ 1.13
PCDH15Q96QU1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDH15Q96QU1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDH15Q96QU1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDH15Q96QU1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH15Q96QU1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.08■■□□□ 1.13
PCDH15Q96QU1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
PCDH15Q96QU1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
PCDH15Q96QU1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.08■■□□□ 1.12
PCDH15Q96QU1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.08■■□□□ 1.12
PCDH15Q96QU1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.08■■□□□ 1.12
PCDH15Q96QU1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.08■■□□□ 1.12
PCDH15Q96QU1 KRT18P61-201ENST00000585825 1298 ntBASIC22.08■■□□□ 1.12
PCDH15Q96QU1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PCDH15Q96QU1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDH15Q96QU1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDH15Q96QU1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDH15Q96QU1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
PCDH15Q96QU1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
PCDH15Q96QU1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDH15Q96QU1 AC133637.1-201ENST00000624115 1537 ntBASIC22.08■■□□□ 1.12
PCDH15Q96QU1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
PCDH15Q96QU1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH15Q96QU1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH15Q96QU1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH15Q96QU1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH15Q96QU1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH15Q96QU1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH15Q96QU1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH15Q96QU1 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.07■■□□□ 1.12
PCDH15Q96QU1 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.07■■□□□ 1.12
PCDH15Q96QU1 OR2I1P-207ENST00000453522 948 ntBASIC22.07■■□□□ 1.12
PCDH15Q96QU1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDH15Q96QU1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH15Q96QU1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH15Q96QU1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDH15Q96QU1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH15Q96QU1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH15Q96QU1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH15Q96QU1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH15Q96QU1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDH15Q96QU1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PCDH15Q96QU1 HLA-L-209ENST00000420110 1011 ntBASIC22.06■■□□□ 1.12
PCDH15Q96QU1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH15Q96QU1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH15Q96QU1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
PCDH15Q96QU1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH15Q96QU1 ALDH1A3-203ENST00000557963 1670 ntBASIC22.05■■□□□ 1.12
PCDH15Q96QU1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH15Q96QU1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDH15Q96QU1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDH15Q96QU1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDH15Q96QU1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDH15Q96QU1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH15Q96QU1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH15Q96QU1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
PCDH15Q96QU1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDH15Q96QU1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.05■■□□□ 1.12
PCDH15Q96QU1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH15Q96QU1 RAP2CP1-201ENST00000605103 478 ntBASIC22.05■■□□□ 1.12
PCDH15Q96QU1 AL499627.2-201ENST00000606283 725 ntBASIC22.05■■□□□ 1.12
PCDH15Q96QU1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PCDH15Q96QU1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH15Q96QU1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDH15Q96QU1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDH15Q96QU1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
PCDH15Q96QU1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDH15Q96QU1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDH15Q96QU1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH15Q96QU1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDH15Q96QU1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDH15Q96QU1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH15Q96QU1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
PCDH15Q96QU1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH15Q96QU1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH15Q96QU1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH15Q96QU1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PCDH15Q96QU1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH15Q96QU1 NTF6G-201ENST00000591094 616 ntBASIC22.03■■□□□ 1.12
PCDH15Q96QU1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDH15Q96QU1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms