Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 pRNA.6-201ENST00000610482 90 ntBASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 pRNA.5-201ENST00000612139 90 ntBASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 pRNA.11-201ENST00000618423 90 ntBASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 pRNA.13-201ENST00000619112 90 ntBASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF20Q5VT98 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 MIR3181-201ENST00000578512 73 ntBASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 MIR4767-201ENST00000582827 78 ntBASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 AC093323.1-202ENST00000635031 2045 ntBASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 AC144652.1-201ENST00000609974 1624 ntBASIC20.49■□□□□ 0.87
PRAMEF20Q5VT98 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF20Q5VT98 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEF20Q5VT98 AC079630.1-202ENST00000618127 1840 ntBASIC20.48■□□□□ 0.87
PRAMEF20Q5VT98 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.48■□□□□ 0.87
PRAMEF20Q5VT98 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF20Q5VT98 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.48■□□□□ 0.87
PRAMEF20Q5VT98 AC133561.4-201ENST00000566112 224 ntBASIC20.48■□□□□ 0.87
PRAMEF20Q5VT98 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEF20Q5VT98 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF20Q5VT98 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF20Q5VT98 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF20Q5VT98 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF20Q5VT98 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF20Q5VT98 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF20Q5VT98 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF20Q5VT98 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF20Q5VT98 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF20Q5VT98 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
PRAMEF20Q5VT98 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF20Q5VT98 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF20Q5VT98 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF20Q5VT98 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF20Q5VT98 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF20Q5VT98 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF20Q5VT98 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF20Q5VT98 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF20Q5VT98 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PRAMEF20Q5VT98 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 AC142381.2-201ENST00000566120 298 ntBASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 AL138724.1-201ENST00000606771 1088 ntBASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 AC011298.3-201ENST00000615796 283 ntBASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF20Q5VT98 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
PRAMEF20Q5VT98 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF20Q5VT98 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF20Q5VT98 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.45■□□□□ 0.86
PRAMEF20Q5VT98 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF20Q5VT98 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PRAMEF20Q5VT98 LINC01529-204ENST00000636474 1715 ntBASIC20.44■□□□□ 0.86
PRAMEF20Q5VT98 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.44■□□□□ 0.86
PRAMEF20Q5VT98 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF20Q5VT98 EDA-201ENST00000338901 1233 ntBASIC20.44■□□□□ 0.86
PRAMEF20Q5VT98 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF20Q5VT98 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
PRAMEF20Q5VT98 AL031432.3-201ENST00000607698 485 ntBASIC20.44■□□□□ 0.86
PRAMEF20Q5VT98 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.44■□□□□ 0.86
PRAMEF20Q5VT98 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF20Q5VT98 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF20Q5VT98 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.44■□□□□ 0.86
PRAMEF20Q5VT98 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms