Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CNOT4O95628 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNOT4O95628 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNOT4O95628 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.82■□□□□ 0.76
CNOT4O95628 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CNOT4O95628 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNOT4O95628 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT4O95628 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CNOT4O95628 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.81■□□□□ 0.76
CNOT4O95628 PBX2P1-201ENST00000493219 1291 ntBASIC19.81■□□□□ 0.76
CNOT4O95628 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT4O95628 AC099791.2-201ENST00000605725 427 ntBASIC19.81■□□□□ 0.76
CNOT4O95628 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT4O95628 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CNOT4O95628 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT4O95628 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT4O95628 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT4O95628 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT4O95628 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT4O95628 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT4O95628 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT4O95628 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CNOT4O95628 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.8■□□□□ 0.76
CNOT4O95628 AC092666.2-201ENST00000613287 246 ntBASIC19.8■□□□□ 0.76
CNOT4O95628 AC106739.1-201ENST00000617035 715 ntBASIC19.8■□□□□ 0.76
CNOT4O95628 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.8■□□□□ 0.76
CNOT4O95628 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT4O95628 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT4O95628 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT4O95628 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.8■□□□□ 0.76
CNOT4O95628 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
CNOT4O95628 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CNOT4O95628 UNC93B3-201ENST00000308076 687 ntBASIC19.79■□□□□ 0.76
CNOT4O95628 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT4O95628 ZNRF2P3-201ENST00000424200 374 ntBASIC19.79■□□□□ 0.76
CNOT4O95628 AC142381.2-201ENST00000566120 298 ntBASIC19.79■□□□□ 0.76
CNOT4O95628 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CNOT4O95628 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT4O95628 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT4O95628 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT4O95628 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT4O95628 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.78■□□□□ 0.76
CNOT4O95628 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.78■□□□□ 0.76
CNOT4O95628 RARRES2P6-201ENST00000567333 442 ntBASIC19.78■□□□□ 0.76
CNOT4O95628 AC011298.3-201ENST00000615796 283 ntBASIC19.78■□□□□ 0.76
CNOT4O95628 AC009086.3-201ENST00000623486 1008 ntBASIC19.78■□□□□ 0.76
CNOT4O95628 AC135279.3-201ENST00000610945 1311 ntBASIC19.77■□□□□ 0.76
CNOT4O95628 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT4O95628 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.77■□□□□ 0.76
CNOT4O95628 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CNOT4O95628 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.77■□□□□ 0.76
CNOT4O95628 AL136162.1-201ENST00000607711 1078 ntBASIC19.77■□□□□ 0.76
CNOT4O95628 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT4O95628 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CNOT4O95628 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT4O95628 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT4O95628 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT4O95628 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CNOT4O95628 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CNOT4O95628 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT4O95628 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT4O95628 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT4O95628 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.76■□□□□ 0.75
CNOT4O95628 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT4O95628 AC144652.1-201ENST00000609974 1624 ntBASIC19.76■□□□□ 0.75
CNOT4O95628 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.76■□□□□ 0.75
CNOT4O95628 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT4O95628 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT4O95628 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT4O95628 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT4O95628 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT4O95628 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT4O95628 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT4O95628 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT4O95628 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT4O95628 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT4O95628 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT4O95628 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT4O95628 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT4O95628 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT4O95628 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT4O95628 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT4O95628 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT4O95628 EDA-201ENST00000338901 1233 ntBASIC19.74■□□□□ 0.75
CNOT4O95628 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.74■□□□□ 0.75
CNOT4O95628 SERBP1P1-201ENST00000396021 1160 ntBASIC19.74■□□□□ 0.75
CNOT4O95628 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.74■□□□□ 0.75
CNOT4O95628 DUX4L4-201ENST00000566884 1269 ntBASIC19.74■□□□□ 0.75
CNOT4O95628 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT4O95628 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.74■□□□□ 0.75
CNOT4O95628 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.74■□□□□ 0.75
CNOT4O95628 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CNOT4O95628 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT4O95628 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT4O95628 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT4O95628 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT4O95628 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT4O95628 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.73■□□□□ 0.75
CNOT4O95628 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT4O95628 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms