Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPK1BO75841 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
UPK1BO75841 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPK1BO75841 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
UPK1BO75841 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
UPK1BO75841 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1BO75841 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1BO75841 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1BO75841 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1BO75841 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.6■□□□□ 0.73
UPK1BO75841 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1BO75841 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1BO75841 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1BO75841 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1BO75841 LINC01521-201ENST00000504184 1943 ntBASIC19.6■□□□□ 0.73
UPK1BO75841 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1BO75841 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.6■□□□□ 0.73
UPK1BO75841 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1BO75841 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
UPK1BO75841 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1BO75841 AL391422.3-201ENST00000603791 2761 ntBASIC19.59■□□□□ 0.73
UPK1BO75841 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1BO75841 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
UPK1BO75841 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1BO75841 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1BO75841 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1BO75841 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1BO75841 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1BO75841 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1BO75841 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1BO75841 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1BO75841 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
UPK1BO75841 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.59■□□□□ 0.73
UPK1BO75841 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1BO75841 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.59■□□□□ 0.73
UPK1BO75841 AC079630.1-202ENST00000618127 1840 ntBASIC19.58■□□□□ 0.73
UPK1BO75841 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
UPK1BO75841 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPK1BO75841 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPK1BO75841 AL161729.1-201ENST00000604104 1402 ntBASIC19.58■□□□□ 0.72
UPK1BO75841 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPK1BO75841 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.57■□□□□ 0.72
UPK1BO75841 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPK1BO75841 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.57■□□□□ 0.72
UPK1BO75841 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UPK1BO75841 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.57■□□□□ 0.72
UPK1BO75841 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
UPK1BO75841 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
UPK1BO75841 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPK1BO75841 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.57■□□□□ 0.72
UPK1BO75841 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPK1BO75841 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.57■□□□□ 0.72
UPK1BO75841 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPK1BO75841 AL157384.1-201ENST00000445995 2473 ntBASIC19.57■□□□□ 0.72
UPK1BO75841 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1BO75841 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1BO75841 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1BO75841 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1BO75841 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1BO75841 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1BO75841 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UPK1BO75841 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.56■□□□□ 0.72
UPK1BO75841 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1BO75841 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
UPK1BO75841 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1BO75841 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
UPK1BO75841 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
UPK1BO75841 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1BO75841 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1BO75841 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1BO75841 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.55■□□□□ 0.72
UPK1BO75841 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1BO75841 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.55■□□□□ 0.72
UPK1BO75841 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1BO75841 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1BO75841 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.55■□□□□ 0.72
UPK1BO75841 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.55■□□□□ 0.72
UPK1BO75841 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1BO75841 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1BO75841 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1BO75841 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
UPK1BO75841 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1BO75841 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
UPK1BO75841 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.54■□□□□ 0.72
UPK1BO75841 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1BO75841 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1BO75841 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1BO75841 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.54■□□□□ 0.72
UPK1BO75841 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1BO75841 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPK1BO75841 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
UPK1BO75841 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK1BO75841 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPK1BO75841 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.53■□□□□ 0.72
UPK1BO75841 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK1BO75841 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.53■□□□□ 0.72
UPK1BO75841 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.53■□□□□ 0.72
UPK1BO75841 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1BO75841 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1BO75841 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms