Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.78■□□□□ 0.44
TRBV9A0A0B4J1U6 MIR4787-201ENST00000607364 84 ntBASIC17.78■□□□□ 0.44
TRBV9A0A0B4J1U6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRBV9A0A0B4J1U6 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.78■□□□□ 0.44
TRBV9A0A0B4J1U6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV9A0A0B4J1U6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV9A0A0B4J1U6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TRBV9A0A0B4J1U6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV9A0A0B4J1U6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV9A0A0B4J1U6 LINC00565-201ENST00000562710 2331 ntBASIC17.77■□□□□ 0.44
TRBV9A0A0B4J1U6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV9A0A0B4J1U6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV9A0A0B4J1U6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV9A0A0B4J1U6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV9A0A0B4J1U6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRBV9A0A0B4J1U6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.77■□□□□ 0.44
TRBV9A0A0B4J1U6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV9A0A0B4J1U6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.77■□□□□ 0.44
TRBV9A0A0B4J1U6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.77■□□□□ 0.44
TRBV9A0A0B4J1U6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV9A0A0B4J1U6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.77■□□□□ 0.44
TRBV9A0A0B4J1U6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
TRBV9A0A0B4J1U6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV9A0A0B4J1U6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV9A0A0B4J1U6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV9A0A0B4J1U6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TRBV9A0A0B4J1U6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV9A0A0B4J1U6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV9A0A0B4J1U6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV9A0A0B4J1U6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV9A0A0B4J1U6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV9A0A0B4J1U6 AL024507.2-201ENST00000606070 2574 ntBASIC17.76■□□□□ 0.43
TRBV9A0A0B4J1U6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV9A0A0B4J1U6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV9A0A0B4J1U6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV9A0A0B4J1U6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.76■□□□□ 0.43
TRBV9A0A0B4J1U6 AL035685.1-201ENST00000636663 812 ntBASIC17.76■□□□□ 0.43
TRBV9A0A0B4J1U6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV9A0A0B4J1U6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRBV9A0A0B4J1U6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.75■□□□□ 0.43
TRBV9A0A0B4J1U6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV9A0A0B4J1U6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.75■□□□□ 0.43
TRBV9A0A0B4J1U6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV9A0A0B4J1U6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
TRBV9A0A0B4J1U6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
TRBV9A0A0B4J1U6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV9A0A0B4J1U6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.75■□□□□ 0.43
TRBV9A0A0B4J1U6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV9A0A0B4J1U6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV9A0A0B4J1U6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV9A0A0B4J1U6 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.75■□□□□ 0.43
TRBV9A0A0B4J1U6 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.75■□□□□ 0.43
TRBV9A0A0B4J1U6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV9A0A0B4J1U6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV9A0A0B4J1U6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
TRBV9A0A0B4J1U6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.74■□□□□ 0.43
TRBV9A0A0B4J1U6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
TRBV9A0A0B4J1U6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.74■□□□□ 0.43
TRBV9A0A0B4J1U6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV9A0A0B4J1U6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRBV9A0A0B4J1U6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV9A0A0B4J1U6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV9A0A0B4J1U6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.74■□□□□ 0.43
TRBV9A0A0B4J1U6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV9A0A0B4J1U6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV9A0A0B4J1U6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV9A0A0B4J1U6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRBV9A0A0B4J1U6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV9A0A0B4J1U6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV9A0A0B4J1U6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV9A0A0B4J1U6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV9A0A0B4J1U6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.73■□□□□ 0.43
TRBV9A0A0B4J1U6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV9A0A0B4J1U6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
TRBV9A0A0B4J1U6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV9A0A0B4J1U6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 C9orf163-202ENST00000624034 2573 ntBASIC17.72■□□□□ 0.43
TRBV9A0A0B4J1U6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV9A0A0B4J1U6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV9A0A0B4J1U6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV9A0A0B4J1U6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV9A0A0B4J1U6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.71■□□□□ 0.43
TRBV9A0A0B4J1U6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
TRBV9A0A0B4J1U6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms