Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV5-3A0A0A0MS03 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV5-3A0A0A0MS03 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.11■□□□□ 0.97
TRBV5-3A0A0A0MS03 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV5-3A0A0A0MS03 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV5-3A0A0A0MS03 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.11■□□□□ 0.97
TRBV5-3A0A0A0MS03 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.11■□□□□ 0.97
TRBV5-3A0A0A0MS03 AC074183.2-201ENST00000623112 922 ntBASIC21.11■□□□□ 0.97
TRBV5-3A0A0A0MS03 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.11■□□□□ 0.97
TRBV5-3A0A0A0MS03 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.11■□□□□ 0.97
TRBV5-3A0A0A0MS03 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV5-3A0A0A0MS03 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV5-3A0A0A0MS03 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TRBV5-3A0A0A0MS03 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 AC004987.1-201ENST00000428627 508 ntBASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 AC139530.1-201ENST00000575312 1977 ntBASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV5-3A0A0A0MS03 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV5-3A0A0A0MS03 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV5-3A0A0A0MS03 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV5-3A0A0A0MS03 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV5-3A0A0A0MS03 ATP5G2P3-201ENST00000429083 425 ntBASIC21.09■□□□□ 0.97
TRBV5-3A0A0A0MS03 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.09■□□□□ 0.97
TRBV5-3A0A0A0MS03 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV5-3A0A0A0MS03 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
TRBV5-3A0A0A0MS03 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV5-3A0A0A0MS03 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV5-3A0A0A0MS03 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.09■□□□□ 0.97
TRBV5-3A0A0A0MS03 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBV5-3A0A0A0MS03 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBV5-3A0A0A0MS03 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBV5-3A0A0A0MS03 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBV5-3A0A0A0MS03 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.08■□□□□ 0.97
TRBV5-3A0A0A0MS03 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
TRBV5-3A0A0A0MS03 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
TRBV5-3A0A0A0MS03 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.08■□□□□ 0.96
TRBV5-3A0A0A0MS03 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRBV5-3A0A0A0MS03 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRBV5-3A0A0A0MS03 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRBV5-3A0A0A0MS03 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.07■□□□□ 0.96
TRBV5-3A0A0A0MS03 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.07■□□□□ 0.96
TRBV5-3A0A0A0MS03 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV5-3A0A0A0MS03 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV5-3A0A0A0MS03 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV5-3A0A0A0MS03 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV5-3A0A0A0MS03 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV5-3A0A0A0MS03 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TRBV5-3A0A0A0MS03 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV5-3A0A0A0MS03 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV5-3A0A0A0MS03 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV5-3A0A0A0MS03 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV5-3A0A0A0MS03 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TRBV5-3A0A0A0MS03 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV5-3A0A0A0MS03 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV5-3A0A0A0MS03 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.06■□□□□ 0.96
TRBV5-3A0A0A0MS03 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.06■□□□□ 0.96
TRBV5-3A0A0A0MS03 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.06■□□□□ 0.96
TRBV5-3A0A0A0MS03 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.06■□□□□ 0.96
TRBV5-3A0A0A0MS03 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV5-3A0A0A0MS03 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.06■□□□□ 0.96
TRBV5-3A0A0A0MS03 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV5-3A0A0A0MS03 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.05■□□□□ 0.96
TRBV5-3A0A0A0MS03 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.05■□□□□ 0.96
TRBV5-3A0A0A0MS03 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.05■□□□□ 0.96
TRBV5-3A0A0A0MS03 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV5-3A0A0A0MS03 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV5-3A0A0A0MS03 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.05■□□□□ 0.96
TRBV5-3A0A0A0MS03 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.05■□□□□ 0.96
TRBV5-3A0A0A0MS03 BHLHE23-202ENST00000612929 1109 ntBASIC21.05■□□□□ 0.96
TRBV5-3A0A0A0MS03 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV5-3A0A0A0MS03 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV5-3A0A0A0MS03 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.05■□□□□ 0.96
TRBV5-3A0A0A0MS03 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV5-3A0A0A0MS03 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.05■□□□□ 0.96
TRBV5-3A0A0A0MS03 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV5-3A0A0A0MS03 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.04■□□□□ 0.96
TRBV5-3A0A0A0MS03 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-3A0A0A0MS03 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-3A0A0A0MS03 AC010980.1-201ENST00000587192 1142 ntBASIC21.04■□□□□ 0.96
TRBV5-3A0A0A0MS03 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TRBV5-3A0A0A0MS03 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-3A0A0A0MS03 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-3A0A0A0MS03 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-3A0A0A0MS03 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.04■□□□□ 0.96
TRBV5-3A0A0A0MS03 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-3A0A0A0MS03 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-3A0A0A0MS03 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms