Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHGA9Q9Y5G4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGA9Q9Y5G4 CAHM-201ENST00000604200 896 ntBASIC26.09■■□□□ 1.77
PCDHGA9Q9Y5G4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGA9Q9Y5G4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGA9Q9Y5G4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDHGA9Q9Y5G4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGA9Q9Y5G4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGA9Q9Y5G4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHGA9Q9Y5G4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.02■■□□□ 1.76
PCDHGA9Q9Y5G4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
PCDHGA9Q9Y5G4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
PCDHGA9Q9Y5G4 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.01■■□□□ 1.75
PCDHGA9Q9Y5G4 AP006261.1-201ENST00000584783 668 ntBASIC26.01■■□□□ 1.75
PCDHGA9Q9Y5G4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHGA9Q9Y5G4 AL391121.1-201ENST00000607967 1349 ntBASIC26■■□□□ 1.75
PCDHGA9Q9Y5G4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHGA9Q9Y5G4 AL162393.1-201ENST00000437852 946 ntBASIC25.96■■□□□ 1.75
PCDHGA9Q9Y5G4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
PCDHGA9Q9Y5G4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHGA9Q9Y5G4 AL133380.1-201ENST00000506013 324 ntBASIC25.95■■□□□ 1.74
PCDHGA9Q9Y5G4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHGA9Q9Y5G4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
PCDHGA9Q9Y5G4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.92■■□□□ 1.74
PCDHGA9Q9Y5G4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHGA9Q9Y5G4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.9■■□□□ 1.74
PCDHGA9Q9Y5G4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.89■■□□□ 1.73
PCDHGA9Q9Y5G4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDHGA9Q9Y5G4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHGA9Q9Y5G4 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.86■■□□□ 1.73
PCDHGA9Q9Y5G4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGA9Q9Y5G4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
PCDHGA9Q9Y5G4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHGA9Q9Y5G4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.81■■□□□ 1.72
PCDHGA9Q9Y5G4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.81■■□□□ 1.72
PCDHGA9Q9Y5G4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHGA9Q9Y5G4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.8■■□□□ 1.72
PCDHGA9Q9Y5G4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.8■■□□□ 1.72
PCDHGA9Q9Y5G4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGA9Q9Y5G4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.79■■□□□ 1.72
PCDHGA9Q9Y5G4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGA9Q9Y5G4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
PCDHGA9Q9Y5G4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHGA9Q9Y5G4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.76■■□□□ 1.71
PCDHGA9Q9Y5G4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHGA9Q9Y5G4 MIR3665-201ENST00000578708 105 ntBASIC25.75■■□□□ 1.71
PCDHGA9Q9Y5G4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
PCDHGA9Q9Y5G4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.74■■□□□ 1.71
PCDHGA9Q9Y5G4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGA9Q9Y5G4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
PCDHGA9Q9Y5G4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.74■■□□□ 1.71
PCDHGA9Q9Y5G4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC25.72■■□□□ 1.71
PCDHGA9Q9Y5G4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGA9Q9Y5G4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
PCDHGA9Q9Y5G4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHGA9Q9Y5G4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHGA9Q9Y5G4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDHGA9Q9Y5G4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDHGA9Q9Y5G4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
PCDHGA9Q9Y5G4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.68■■□□□ 1.7
PCDHGA9Q9Y5G4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHGA9Q9Y5G4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
PCDHGA9Q9Y5G4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGA9Q9Y5G4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGA9Q9Y5G4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGA9Q9Y5G4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGA9Q9Y5G4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
PCDHGA9Q9Y5G4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGA9Q9Y5G4 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.6■■□□□ 1.69
PCDHGA9Q9Y5G4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGA9Q9Y5G4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGA9Q9Y5G4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.59■■□□□ 1.69
PCDHGA9Q9Y5G4 AC087741.3-201ENST00000624270 1347 ntBASIC25.59■■□□□ 1.69
PCDHGA9Q9Y5G4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.58■■□□□ 1.68
PCDHGA9Q9Y5G4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA9Q9Y5G4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.57■■□□□ 1.68
PCDHGA9Q9Y5G4 DUX4L28-201ENST00000623687 678 ntBASIC25.57■■□□□ 1.68
PCDHGA9Q9Y5G4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA9Q9Y5G4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDHGA9Q9Y5G4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA9Q9Y5G4 ABHD17AP4-201ENST00000411545 909 ntBASIC25.56■■□□□ 1.68
PCDHGA9Q9Y5G4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA9Q9Y5G4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA9Q9Y5G4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGA9Q9Y5G4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.55■■□□□ 1.68
PCDHGA9Q9Y5G4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGA9Q9Y5G4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGA9Q9Y5G4 MIR762-201ENST00000390236 83 ntBASIC25.54■■□□□ 1.68
PCDHGA9Q9Y5G4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.54■■□□□ 1.68
PCDHGA9Q9Y5G4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGA9Q9Y5G4 AC044849.2-201ENST00000606596 710 ntBASIC25.53■■□□□ 1.68
PCDHGA9Q9Y5G4 MIR7108-201ENST00000614319 87 ntBASIC25.52■■□□□ 1.68
PCDHGA9Q9Y5G4 AC005559.1-201ENST00000589661 871 ntBASIC25.5■■□□□ 1.67
PCDHGA9Q9Y5G4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA9Q9Y5G4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHGA9Q9Y5G4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGA9Q9Y5G4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.46■■□□□ 1.67
PCDHGA9Q9Y5G4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGA9Q9Y5G4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGA9Q9Y5G4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms