Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC33.66■■■□□ 2.98
COL13A1Q5TAT6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
COL13A1Q5TAT6 AL391121.1-201ENST00000607967 1349 ntBASIC33.61■■■□□ 2.97
COL13A1Q5TAT6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC33.6■■■□□ 2.97
COL13A1Q5TAT6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC33.6■■■□□ 2.97
COL13A1Q5TAT6 HSD17B1P1-201ENST00000590052 955 ntBASIC33.59■■■□□ 2.97
COL13A1Q5TAT6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC33.57■■■□□ 2.96
COL13A1Q5TAT6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC33.54■■■□□ 2.96
COL13A1Q5TAT6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC33.54■■■□□ 2.96
COL13A1Q5TAT6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
COL13A1Q5TAT6 AC044849.2-201ENST00000606596 710 ntBASIC33.48■■■□□ 2.95
COL13A1Q5TAT6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC33.47■■■□□ 2.95
COL13A1Q5TAT6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC33.47■■■□□ 2.95
COL13A1Q5TAT6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
COL13A1Q5TAT6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
COL13A1Q5TAT6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
COL13A1Q5TAT6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
COL13A1Q5TAT6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
COL13A1Q5TAT6 DUX4L28-201ENST00000623687 678 ntBASIC33.41■■■□□ 2.94
COL13A1Q5TAT6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC33.4■■■□□ 2.94
COL13A1Q5TAT6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC33.4■■■□□ 2.94
COL13A1Q5TAT6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
COL13A1Q5TAT6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC33.36■■■□□ 2.93
COL13A1Q5TAT6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC33.36■■■□□ 2.93
COL13A1Q5TAT6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC33.35■■■□□ 2.93
COL13A1Q5TAT6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC33.32■■■□□ 2.92
COL13A1Q5TAT6 MIR639-201ENST00000384974 98 ntBASIC33.31■■■□□ 2.92
COL13A1Q5TAT6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
COL13A1Q5TAT6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC33.3■■■□□ 2.92
COL13A1Q5TAT6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
COL13A1Q5TAT6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
COL13A1Q5TAT6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC33.22■■■□□ 2.91
COL13A1Q5TAT6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC33.22■■■□□ 2.91
COL13A1Q5TAT6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC33.2■■■□□ 2.91
COL13A1Q5TAT6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
COL13A1Q5TAT6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC33.18■■■□□ 2.9
COL13A1Q5TAT6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC33.16■■■□□ 2.9
COL13A1Q5TAT6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC33.16■■■□□ 2.9
COL13A1Q5TAT6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC33.13■■■□□ 2.89
COL13A1Q5TAT6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC33.12■■■□□ 2.89
COL13A1Q5TAT6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
COL13A1Q5TAT6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC33.11■■■□□ 2.89
COL13A1Q5TAT6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC33.1■■■□□ 2.89
COL13A1Q5TAT6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
COL13A1Q5TAT6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
COL13A1Q5TAT6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC33.09■■■□□ 2.89
COL13A1Q5TAT6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
COL13A1Q5TAT6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC33.03■■■□□ 2.88
COL13A1Q5TAT6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
COL13A1Q5TAT6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
COL13A1Q5TAT6 CHML-205ENST00000638160 705 ntTSL 3 BASIC33■■■□□ 2.87
COL13A1Q5TAT6 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.99■■■□□ 2.87
COL13A1Q5TAT6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
COL13A1Q5TAT6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.98■■■□□ 2.87
COL13A1Q5TAT6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
COL13A1Q5TAT6 AC005559.1-201ENST00000589661 871 ntBASIC32.95■■■□□ 2.87
COL13A1Q5TAT6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.93■■■□□ 2.86
COL13A1Q5TAT6 MIR762-201ENST00000390236 83 ntBASIC32.92■■■□□ 2.86
COL13A1Q5TAT6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.92■■■□□ 2.86
COL13A1Q5TAT6 AL133380.1-201ENST00000506013 324 ntBASIC32.92■■■□□ 2.86
COL13A1Q5TAT6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.91■■■□□ 2.86
COL13A1Q5TAT6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.9■■■□□ 2.86
COL13A1Q5TAT6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
COL13A1Q5TAT6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.86■■■□□ 2.85
COL13A1Q5TAT6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
COL13A1Q5TAT6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
COL13A1Q5TAT6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.84
COL13A1Q5TAT6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC32.81■■■□□ 2.84
COL13A1Q5TAT6 AC016575.1-201ENST00000607026 382 ntBASIC32.81■■■□□ 2.84
COL13A1Q5TAT6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
COL13A1Q5TAT6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
COL13A1Q5TAT6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.76■■■□□ 2.83
COL13A1Q5TAT6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
COL13A1Q5TAT6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
COL13A1Q5TAT6 MIR3648-2-201ENST00000581792 180 ntBASIC32.73■■■□□ 2.83
COL13A1Q5TAT6 MIR3648-1-201ENST00000615959 180 ntBASIC32.73■■■□□ 2.83
COL13A1Q5TAT6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
COL13A1Q5TAT6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
COL13A1Q5TAT6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC32.69■■■□□ 2.82
COL13A1Q5TAT6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
COL13A1Q5TAT6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC32.69■■■□□ 2.82
COL13A1Q5TAT6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.67■■■□□ 2.82
COL13A1Q5TAT6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.66■■■□□ 2.82
COL13A1Q5TAT6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
COL13A1Q5TAT6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
COL13A1Q5TAT6 DUX4L29-201ENST00000425409 679 ntBASIC32.64■■■□□ 2.82
COL13A1Q5TAT6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.64■■■□□ 2.82
COL13A1Q5TAT6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.63■■■□□ 2.81
COL13A1Q5TAT6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
COL13A1Q5TAT6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.62■■■□□ 2.81
COL13A1Q5TAT6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.61■■■□□ 2.81
COL13A1Q5TAT6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.61■■■□□ 2.81
COL13A1Q5TAT6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
COL13A1Q5TAT6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.58■■■□□ 2.81
COL13A1Q5TAT6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
COL13A1Q5TAT6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
COL13A1Q5TAT6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.53■■■□□ 2.8
COL13A1Q5TAT6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.53■■■□□ 2.8
COL13A1Q5TAT6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC32.52■■■□□ 2.8
COL13A1Q5TAT6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.52■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms