Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 ZNF627-201ENST00000361113 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.524e-13■■■■■ 63.4
DDX59Q5T1V6 ZNF627-204ENST00000588174 2755 ntTSL 2 BASIC11.1□□□□□ -0.634e-13■■■■■ 63.4
DDX59Q5T1V6 ZNF627-202ENST00000585493 541 ntTSL 47.66□□□□□ -1.184e-13■■■■■ 63.4
DDX59Q5T1V6 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.56e-7■■■■■ 62.8
DDX59Q5T1V6 PTPRG-203ENST00000474889 9021 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.686e-7■■■■■ 62.8
DDX59Q5T1V6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.013e-7■■■■■ 62.4
DDX59Q5T1V6 CTDNEP1-206ENST00000571409 741 ntTSL 527.27■■□□□ 1.963e-7■■■■■ 62.4
DDX59Q5T1V6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.693e-7■■■■■ 62.4
DDX59Q5T1V6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.193e-7■■■■■ 62.4
DDX59Q5T1V6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.03■□□□□ 0.163e-7■■■■■ 62.4
DDX59Q5T1V6 CTDNEP1-211ENST00000575783 876 ntTSL 514.16□□□□□ -0.143e-7■■■■■ 62.4
DDX59Q5T1V6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.356e-9■■■■■ 62.4
DDX59Q5T1V6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.98■□□□□ 0.316e-9■■■■■ 62.4
DDX59Q5T1V6 HDAC10-203ENST00000415993 2375 ntTSL 1 (best)16.47■□□□□ 0.236e-9■■■■■ 62.4
DDX59Q5T1V6 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51e-8■■■■■ 61.5
DDX59Q5T1V6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.531e-8■■■■■ 61.5
DDX59Q5T1V6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.651e-8■■■■■ 61.5
DDX59Q5T1V6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19■□□□□ 0.634e-7■■■■■ 61.5
DDX59Q5T1V6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.094e-7■■■■■ 61.5
DDX59Q5T1V6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.14■□□□□ 0.492e-7■■■■■ 61.1
DDX59Q5T1V6 ASMTL-AS1-204ENST00000443929 574 ntTSL 214.75□□□□□ -0.052e-7■■■■■ 61.1
DDX59Q5T1V6 PCGF2-201ENST00000610747 459 ntTSL 212.34□□□□□ -0.431e-15■■■■■ 60.2
DDX59Q5T1V6 PIP5K1C-208ENST00000637724 435 ntTSL 318■□□□□ 0.476e-7■■■■■ 60.1
DDX59Q5T1V6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.22■□□□□ 0.671e-19■■■■■ 60
DDX59Q5T1V6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.491e-19■■■■■ 60
DDX59Q5T1V6 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21e-19■■■■■ 60
DDX59Q5T1V6 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.221e-19■■■■■ 60
DDX59Q5T1V6 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.321e-19■■■■■ 60
DDX59Q5T1V6 FAM213A-201ENST00000372181 2058 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.471e-19■■■■■ 60
DDX59Q5T1V6 ATP11A-206ENST00000419631 2446 ntTSL 312.58□□□□□ -0.45e-16■■■■■ 59.7
DDX59Q5T1V6 ATP11A-210ENST00000471555 5786 ntTSL 1 (best)11.21□□□□□ -0.615e-16■■■■■ 59.7
DDX59Q5T1V6 ATP11A-217ENST00000614170 3542 nt9.99□□□□□ -0.815e-16■■■■■ 59.7
DDX59Q5T1V6 PIP5K1C-204ENST00000587482 1311 ntTSL 514.76□□□□□ -0.056e-7■■■■■ 58.6
DDX59Q5T1V6 ATP11A-205ENST00000419448 435 ntTSL 37.14□□□□□ -1.278e-8■■■■■ 58.6
DDX59Q5T1V6 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.63□□□□□ -0.237e-12■■■■■ 58.1
DDX59Q5T1V6 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.5□□□□□ -0.257e-12■■■■■ 58.1
DDX59Q5T1V6 ADAM17-202ENST00000478059 1073 ntTSL 1 (best)11.94□□□□□ -0.57e-12■■■■■ 58.1
DDX59Q5T1V6 ADAM17-201ENST00000310823 4349 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.727e-12■■■■■ 58.1
DDX59Q5T1V6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.93e-8■■■■■ 57.9
DDX59Q5T1V6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.1■□□□□ 0.173e-8■■■■■ 57.9
DDX59Q5T1V6 EEFSEC-204ENST00000484438 640 ntTSL 314.33□□□□□ -0.123e-8■■■■■ 57.9
DDX59Q5T1V6 HERC2-207ENST00000564734 3121 ntTSL 1 (best)14.68□□□□□ -0.066e-12■■■■■ 57.9
DDX59Q5T1V6 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.266e-12■■■■■ 57.9
DDX59Q5T1V6 HERC2-205ENST00000564383 471 ntTSL 36.42□□□□□ -1.386e-12■■■■■ 57.9
DDX59Q5T1V6 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.117e-7■■■■■ 57.9
DDX59Q5T1V6 PIDD1-205ENST00000527357 4496 ntTSL 213.75□□□□□ -0.217e-7■■■■■ 57.9
DDX59Q5T1V6 PIDD1-204ENST00000525028 3175 ntTSL 1 (best)13.45□□□□□ -0.267e-7■■■■■ 57.9
DDX59Q5T1V6 PIDD1-203ENST00000524486 3917 ntTSL 212.56□□□□□ -0.47e-7■■■■■ 57.9
DDX59Q5T1V6 PIDD1-210ENST00000534525 3994 ntTSL 212.28□□□□□ -0.447e-7■■■■■ 57.9
DDX59Q5T1V6 AC126755.1-201ENST00000525846 6405 ntBASIC15.44■□□□□ 0.066e-13■■■■■ 57.8
DDX59Q5T1V6 FNDC3B-207ENST00000469491 2916 ntTSL 216.32■□□□□ 0.23e-7■■■■■ 57.8
DDX59Q5T1V6 FNDC3B-202ENST00000415807 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.63e-7■■■■■ 57.8
DDX59Q5T1V6 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.993e-7■■■■■ 57.8
DDX59Q5T1V6 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.063e-7■■■■■ 57.8
DDX59Q5T1V6 FNDC3B-206ENST00000443501 678 ntTSL 36.97□□□□□ -1.293e-7■■■■■ 57.8
DDX59Q5T1V6 FNDC3B-209ENST00000478016 554 ntTSL 43.35□□□□□ -1.873e-7■■■■■ 57.8
DDX59Q5T1V6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.033e-14■■■■■ 57.3
DDX59Q5T1V6 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.263e-14■■■■■ 57.3
DDX59Q5T1V6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.461e-7■■■■■ 57
DDX59Q5T1V6 FXYD1-210ENST00000592818 959 ntTSL 517.22■□□□□ 0.351e-7■■■■■ 57
DDX59Q5T1V6 FXYD1-207ENST00000589121 512 ntTSL 316.71■□□□□ 0.271e-7■■■■■ 57
DDX59Q5T1V6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.011e-7■■■■■ 57
DDX59Q5T1V6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.011e-7■■■■■ 57
DDX59Q5T1V6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.151e-7■■■■■ 57
DDX59Q5T1V6 AC020907.2-201ENST00000586871 588 ntTSL 49.73□□□□□ -0.851e-7■■■■■ 57
DDX59Q5T1V6 FXYD1-206ENST00000588715 486 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.031e-7■■■■■ 57
DDX59Q5T1V6 AC020907.2-202ENST00000592174 728 ntTSL 3 BASIC8.08□□□□□ -1.121e-7■■■■■ 57
DDX59Q5T1V6 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.191e-7■■■■■ 57
DDX59Q5T1V6 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.21e-7■■■■■ 57
DDX59Q5T1V6 FXYD1-209ENST00000590462 620 ntTSL 26.84□□□□□ -1.311e-7■■■■■ 57
DDX59Q5T1V6 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -11e-12■■■■■ 57
DDX59Q5T1V6 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.211e-12■■■■■ 57
DDX59Q5T1V6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.731e-12■■■■■ 57
DDX59Q5T1V6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.771e-12■■■■■ 57
DDX59Q5T1V6 GPBP1-202ENST00000309096 1385 ntTSL 23.63□□□□□ -1.831e-12■■■■■ 57
DDX59Q5T1V6 GPBP1-209ENST00000515484 962 ntTSL 23.4□□□□□ -1.871e-12■■■■■ 57
DDX59Q5T1V6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.991e-12■■■■■ 57
DDX59Q5T1V6 PKD1P6-201ENST00000343738 4769 ntBASIC20.56■□□□□ 0.885e-10■■■■■ 57
DDX59Q5T1V6 LCN12-208ENST00000480204 436 ntTSL 313.84□□□□□ -0.196e-10■■■■■ 56.7
DDX59Q5T1V6 ASGR2-205ENST00000574868 1202 ntTSL 514.9□□□□□ -0.028e-7■■■■■ 56.6
DDX59Q5T1V6 ASGR2-206ENST00000576487 1055 ntTSL 1 (best)14.6□□□□□ -0.078e-7■■■■■ 56.6
DDX59Q5T1V6 ASGR2-204ENST00000450034 932 ntTSL 213.08□□□□□ -0.328e-7■■■■■ 56.6
DDX59Q5T1V6 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.418e-7■■■■■ 56.6
DDX59Q5T1V6 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.488e-7■■■■■ 56.6
DDX59Q5T1V6 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC12.01□□□□□ -0.498e-7■■■■■ 56.6
DDX59Q5T1V6 BCAM-209ENST00000590624 991 ntTSL 1 (best)17.79■□□□□ 0.446e-38■■■■■ 56.5
DDX59Q5T1V6 HIPK3-205ENST00000531504 591 ntTSL 217.27■□□□□ 0.363e-12■■■■■ 56.2
DDX59Q5T1V6 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.51□□□□□ -0.093e-12■■■■■ 56.2
DDX59Q5T1V6 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.13e-12■■■■■ 56.2
DDX59Q5T1V6 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.233e-12■■■■■ 56.2
DDX59Q5T1V6 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.653e-12■■■■■ 56.2
DDX59Q5T1V6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.51■■□□□ 1.672e-11■■■■■ 56.1
DDX59Q5T1V6 SSBP4-203ENST00000593641 900 ntTSL 520.12■□□□□ 0.812e-11■■■■■ 56.1
DDX59Q5T1V6 PDXDC2P-NPIPB14P-204ENST00000530079 2764 ntTSL 512.63□□□□□ -0.393e-15■■■■■ 56
DDX59Q5T1V6 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC12.01□□□□□ -0.493e-15■■■■■ 56
DDX59Q5T1V6 NPIPB14P-203ENST00000532298 987 ntBASIC5.62□□□□□ -1.513e-15■■■■■ 56
DDX59Q5T1V6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.236e-7■■■■■ 56
DDX59Q5T1V6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.676e-7■■■■■ 56
DDX59Q5T1V6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.46e-7■■■■■ 56
DDX59Q5T1V6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.066e-7■■■■■ 56
Retrieved 100 of 7,289 protein–RNA pairs in 446.6 ms