RNA–Protein interactions for RNA: ENST00000309096.4

GPBP1-202, Transcript of GC-rich promoter binding protein 1, humanhuman

TSL 2

Gene GPBP1, Length 1,385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-202ENST00000309096 AEBP2Q6ZN18 517 aaPredicted RBP24.45■■□□□ 1.5
GPBP1-202ENST00000309096 CHIC1Q5VXU3 224 aa23.79■■□□□ 1.4
GPBP1-202ENST00000309096 PHF23Q9BUL5 403 aaPredicted RBP20.97■□□□□ 0.95
GPBP1-202ENST00000309096 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
GPBP1-202ENST00000309096 FOXD1Q16676 465 aa19.51■□□□□ 0.71
GPBP1-202ENST00000309096 PLPPR3Q6T4P5 718 aa19.27■□□□□ 0.68
GPBP1-202ENST00000309096 PPP6R1Q9UPN7 881 aa18.5■□□□□ 0.55
GPBP1-202ENST00000309096 ADRA2BP18089 450 aa18.43■□□□□ 0.54
GPBP1-202ENST00000309096 MSH5O43196 834 aa18.38■□□□□ 0.53
GPBP1-202ENST00000309096 PIAS4Q8N2W9 510 aaPredicted RBP18.26■□□□□ 0.51
GPBP1-202ENST00000309096 POTEDQ86YR6 584 aa18.18■□□□□ 0.5
GPBP1-202ENST00000309096 PPP4R3CPQ6ZMV5 832 aa16.98■□□□□ 0.31
GPBP1-202ENST00000309096 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
GPBP1-202ENST00000309096 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
GPBP1-202ENST00000309096 KCNA4P22459 653 aa16.56■□□□□ 0.24
GPBP1-202ENST00000309096 DMRT2Q9Y5R5 561 aa16.56■□□□□ 0.24
GPBP1-202ENST00000309096 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
GPBP1-202ENST00000309096 NCBP3Q53F19 620 aaKnown RBP16.46■□□□□ 0.23
GPBP1-202ENST00000309096 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
GPBP1-202ENST00000309096 RNF216Q9NWF9 866 aaPredicted RBP16.21■□□□□ 0.19
GPBP1-202ENST00000309096 HOXD11P31277 338 aaPredicted RBP16.19■□□□□ 0.18
GPBP1-202ENST00000309096 DCAF8L1A6NGE4 600 aa16.04■□□□□ 0.16
GPBP1-202ENST00000309096 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
GPBP1-202ENST00000309096 DNAJC5BQ9UF47 199 aa15.91■□□□□ 0.14
GPBP1-202ENST00000309096 SLC4A1APQ9BWU0 796 aaKnown RBP15.71■□□□□ 0.11
GPBP1-202ENST00000309096 RNF39Q9H2S5 420 aa15.62■□□□□ 0.09
GPBP1-202ENST00000309096 SLC4A2P04920 1241 aa15.44■□□□□ 0.06
GPBP1-202ENST00000309096 C1QBPQ07021 282 aaKnown RBP15.43■□□□□ 0.06
GPBP1-202ENST00000309096 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.33■□□□□ 0.042e-7■□□□□ 9.9
GPBP1-202ENST00000309096 ZBTB22O15209 634 aa15.29■□□□□ 0.04
GPBP1-202ENST00000309096 FOXD4L1Q9NU39 408 aa15.23■□□□□ 0.03
GPBP1-202ENST00000309096 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
GPBP1-202ENST00000309096 U3KPZ7 1027 aaPredicted RBP15.17■□□□□ 0.02
GPBP1-202ENST00000309096 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
GPBP1-202ENST00000309096 MYCNP04198 464 aaPredicted RBP15.03■□□□□ -0
GPBP1-202ENST00000309096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.87□□□□□ -0.03
GPBP1-202ENST00000309096 HNRNPUL2Q1KMD3 747 aaKnown RBP14.87□□□□□ -0.03
GPBP1-202ENST00000309096 SAMD1Q6SPF0 538 aaPredicted RBP14.84□□□□□ -0.03
GPBP1-202ENST00000309096 SPINK5Q9NQ38 1064 aaPredicted RBP14.74□□□□□ -0.05
GPBP1-202ENST00000309096 CAPN15O75808 1086 aa14.73□□□□□ -0.05
GPBP1-202ENST00000309096 ATXN8OSP0DMR3 200 aa14.71□□□□□ -0.06
GPBP1-202ENST00000309096 APLP2Q06481 763 aa14.7□□□□□ -0.06
GPBP1-202ENST00000309096 ATF5Q9Y2D1 282 aaPredicted RBP14.69□□□□□ -0.06
GPBP1-202ENST00000309096 DSG3P32926 999 aa14.59□□□□□ -0.07
GPBP1-202ENST00000309096 ZNF219Q9P2Y4 722 aaPredicted RBP14.56□□□□□ -0.08
GPBP1-202ENST00000309096 TRHP20396 242 aaPredicted RBP14.54□□□□□ -0.08
GPBP1-202ENST00000309096 ABCB7O75027 752 aa14.36□□□□□ -0.11
GPBP1-202ENST00000309096 POLA2Q14181 598 aa14.33□□□□□ -0.12
GPBP1-202ENST00000309096 POTEHQ6S545 545 aa14.25□□□□□ -0.13
GPBP1-202ENST00000309096 MKRN4PQ13434 485 aaPredicted RBP14.06□□□□□ -0.16
GPBP1-202ENST00000309096 ZBTB12Q9Y330 459 aaPredicted RBP14.06□□□□□ -0.16
GPBP1-202ENST00000309096 RBM42Q9BTD8 480 aaKnown RBP13.97□□□□□ -0.17
GPBP1-202ENST00000309096 FBLN2P98095 1184 aa13.96□□□□□ -0.17
GPBP1-202ENST00000309096 OSCARQ8IYS5 282 aa13.86□□□□□ -0.19
GPBP1-202ENST00000309096 CHRDL2Q6WN34 429 aa13.72□□□□□ -0.21
GPBP1-202ENST00000309096 SPDYE2BA6NHP3 402 aa13.71□□□□□ -0.22
GPBP1-202ENST00000309096 SPDYE6P0CI01 402 aa13.71□□□□□ -0.22
GPBP1-202ENST00000309096 SPDYE2Q495Y8 402 aa13.71□□□□□ -0.22
GPBP1-202ENST00000309096 SSUH2Q9Y2M2 353 aa13.65□□□□□ -0.22
GPBP1-202ENST00000309096 SPDYE4A6NLX3 237 aa13.64□□□□□ -0.23
GPBP1-202ENST00000309096 FKBP8Q14318 412 aa13.61□□□□□ -0.23
GPBP1-202ENST00000309096 ZNF692Q9BU19 519 aaPredicted RBP13.61□□□□□ -0.23
GPBP1-202ENST00000309096 AKT1S1Q96B36 256 aa13.59□□□□□ -0.23
GPBP1-202ENST00000309096 PROM2Q8N271 834 aa13.52□□□□□ -0.25
GPBP1-202ENST00000309096 REM2Q8IYK8 340 aaPredicted RBP13.46□□□□□ -0.25
GPBP1-202ENST00000309096 PABPN1Q86U42 306 aaKnown RBP eCLIP13.45□□□□□ -0.26
GPBP1-202ENST00000309096 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
GPBP1-202ENST00000309096 PITPNM1O00562 1244 aa13.31□□□□□ -0.28
GPBP1-202ENST00000309096 SPDYE1Q8NFV5 336 aaPredicted RBP13.29□□□□□ -0.28
GPBP1-202ENST00000309096 SP7Q8TDD2 431 aaPredicted RBP13.29□□□□□ -0.28
GPBP1-202ENST00000309096 HAX1O00165 279 aa13.23□□□□□ -0.29
GPBP1-202ENST00000309096 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.29
GPBP1-202ENST00000309096 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
GPBP1-202ENST00000309096 STAG3Q9UJ98 1225 aa13.19□□□□□ -0.3
GPBP1-202ENST00000309096 FBXO3Q9UK99 471 aa13.11□□□□□ -0.31
GPBP1-202ENST00000309096 PRR29P0C7W0 189 aa13.09□□□□□ -0.31
GPBP1-202ENST00000309096 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
GPBP1-202ENST00000309096 VASPP50552 380 aaPredicted RBP12.98□□□□□ -0.33
GPBP1-202ENST00000309096 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
GPBP1-202ENST00000309096 EVX2Q03828 476 aa12.94□□□□□ -0.34
GPBP1-202ENST00000309096 CHADLQ6NUI6 762 aa12.94□□□□□ -0.34
GPBP1-202ENST00000309096 MNX1P50219 401 aaPredicted RBP12.89□□□□□ -0.35
GPBP1-202ENST00000309096 MIER1Q8N108 512 aa12.89□□□□□ -0.35
GPBP1-202ENST00000309096 PLCD3Q8N3E9 789 aa12.87□□□□□ -0.35
GPBP1-202ENST00000309096 IFNLR1Q8IU57 520 aaPredicted RBP12.83□□□□□ -0.36
GPBP1-202ENST00000309096 FARP1Q9Y4F1 1045 aaPredicted RBP12.81□□□□□ -0.36
GPBP1-202ENST00000309096 C19orf67A6NJJ6 358 aa12.8□□□□□ -0.36
GPBP1-202ENST00000309096 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
GPBP1-202ENST00000309096 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
GPBP1-202ENST00000309096 GABBR2O75899 941 aa12.69□□□□□ -0.38
GPBP1-202ENST00000309096 NPM1P06748 294 aaKnown RBP eCLIP12.68□□□□□ -0.38
GPBP1-202ENST00000309096 KLHL34Q8N239 644 aa12.68□□□□□ -0.38
GPBP1-202ENST00000309096 NUBP1P53384 320 aa12.67□□□□□ -0.38
GPBP1-202ENST00000309096 SPOCK2Q92563 424 aa12.63□□□□□ -0.39
GPBP1-202ENST00000309096 RASEFQ8IZ41 740 aa12.61□□□□□ -0.39
GPBP1-202ENST00000309096 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
GPBP1-202ENST00000309096 FAM212AQ96EL1 285 aa12.5□□□□□ -0.41
GPBP1-202ENST00000309096 TSPYL2Q9H2G4 693 aaPredicted RBP12.49□□□□□ -0.41
GPBP1-202ENST00000309096 LHX8Q68G74 356 aa12.48□□□□□ -0.41
GPBP1-202ENST00000309096 CCDC61Q9Y6R9 512 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms