RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 PELP1Q8IZL8 1130 aaKnown RBP11.77□□□□□ -0.53
HERC2-201ENST00000261609 MYT1Q01538 1121 aa11.72□□□□□ -0.53
HERC2-201ENST00000261609 DCAF8L2P0C7V8 631 aa11.57□□□□□ -0.56
HERC2-201ENST00000261609 SUPT5HO00267 1087 aaKnown RBP11.31□□□□□ -0.6
HERC2-201ENST00000261609 PCGF6Q9BYE7 350 aa11.24□□□□□ -0.61
HERC2-201ENST00000261609 CENPBP07199 599 aaPredicted RBP11.23□□□□□ -0.61
HERC2-201ENST00000261609 ERICH6Q7L0X2 663 aa11.22□□□□□ -0.61
HERC2-201ENST00000261609 CCER1Q8TC90 406 aaPredicted RBP11.12□□□□□ -0.63
HERC2-201ENST00000261609 ZEB1P37275 1124 aaPredicted RBP11.08□□□□□ -0.64
HERC2-201ENST00000261609 EHMT2Q96KQ7 1210 aa11.01□□□□□ -0.65
HERC2-201ENST00000261609 SHROOM4Q9ULL8 1493 aa10.98□□□□□ -0.65
HERC2-201ENST00000261609 NISCHQ9Y2I1 1504 aa10.93□□□□□ -0.66
HERC2-201ENST00000261609 APLP2Q06481 763 aa10.92□□□□□ -0.66
HERC2-201ENST00000261609 YTHDC1Q96MU7 727 aaKnown RBP10.87□□□□□ -0.67
HERC2-201ENST00000261609 HRCP23327 699 aa10.84□□□□□ -0.67
HERC2-201ENST00000261609 NEFLP07196 543 aa10.83□□□□□ -0.68
HERC2-201ENST00000261609 TTBK1Q5TCY1 1321 aaPredicted RBP10.81□□□□□ -0.68
HERC2-201ENST00000261609 FAM9AQ8IZU1 332 aaPredicted RBP10.66□□□□□ -0.7
HERC2-201ENST00000261609 PPARGC1BQ86YN6 1023 aaKnown RBP10.62□□□□□ -0.71
HERC2-201ENST00000261609 DAXXQ9UER7 740 aaPredicted RBP10.6□□□□□ -0.71
HERC2-201ENST00000261609 TRIM26Q12899 539 aaPredicted RBP10.57□□□□□ -0.72
HERC2-201ENST00000261609 RTL5Q5HYW3 569 aaPredicted RBP10.51□□□□□ -0.73
HERC2-201ENST00000261609 TRIM41Q8WV44 630 aa10.5□□□□□ -0.73
HERC2-201ENST00000261609 GTF3C3Q9Y5Q9 886 aa10.49□□□□□ -0.73
HERC2-201ENST00000261609 DIEXFQ68CQ4 756 aaKnown RBP10.43□□□□□ -0.74
HERC2-201ENST00000261609 UBTFP17480 764 aaKnown RBP10.4□□□□□ -0.74
HERC2-201ENST00000261609 RANGAP1P46060 587 aaPredicted RBP10.39□□□□□ -0.75
HERC2-201ENST00000261609 ZNF316A6NFI3 1004 aaPredicted RBP10.34□□□□□ -0.75
HERC2-201ENST00000261609 ACIN1Q9UKV3 1341 aaKnown RBP10.33□□□□□ -0.76
HERC2-201ENST00000261609 ATP1B4Q9UN42 357 aaPredicted RBP10.32□□□□□ -0.76
HERC2-201ENST00000261609 EIF5BO60841 1220 aaKnown RBP10.3□□□□□ -0.76
HERC2-201ENST00000261609 CDK11AQ9UQ88 783 aaPredicted RBP10.29□□□□□ -0.76
HERC2-201ENST00000261609 LOC105371045A0A1W2PR82 267 aa10.29□□□□□ -0.76
HERC2-201ENST00000261609 BCANQ96GW7 911 aa10.28□□□□□ -0.76
HERC2-201ENST00000261609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.19□□□□□ -0.78
HERC2-201ENST00000261609 GLIPR1L2Q4G1C9 344 aa10.19□□□□□ -0.78
HERC2-201ENST00000261609 CLSPNQ9HAW4 1339 aa10.15□□□□□ -0.79
HERC2-201ENST00000261609 SCAF1Q9H7N4 1312 aaKnown RBP10.14□□□□□ -0.79
HERC2-201ENST00000261609 MYT1LQ9UL68 1186 aa10.14□□□□□ -0.79
HERC2-201ENST00000261609 HNRNPUL2Q1KMD3 747 aaKnown RBP10.12□□□□□ -0.79
HERC2-201ENST00000261609 POLR3GLQ9BT43 218 aa10.11□□□□□ -0.79
HERC2-201ENST00000261609 CHIC1Q5VXU3 224 aa10.1□□□□□ -0.79
HERC2-201ENST00000261609 CNGB1Q14028 1251 aaPredicted RBP10.09□□□□□ -0.79
HERC2-201ENST00000261609 ITGAEP38570 1179 aa10.07□□□□□ -0.8
HERC2-201ENST00000261609 ANP32AP39687 249 aaKnown RBP10.06□□□□□ -0.8
HERC2-201ENST00000261609 NEUROD1Q13562 356 aa10.04□□□□□ -0.8
HERC2-201ENST00000261609 NBR1Q14596 966 aa10.01□□□□□ -0.81
HERC2-201ENST00000261609 ANP32CO43423 234 aa9.99□□□□□ -0.81
HERC2-201ENST00000261609 ANP32EQ9BTT0 268 aa9.99□□□□□ -0.81
HERC2-201ENST00000261609 BCL11AQ9H165 835 aa9.98□□□□□ -0.81
HERC2-201ENST00000261609 FKBP8Q14318 412 aa9.96□□□□□ -0.82
HERC2-201ENST00000261609 NPM2Q86SE8 214 aaKnown RBP9.95□□□□□ -0.82
HERC2-201ENST00000261609 ANP32BQ92688 251 aaKnown RBP9.92□□□□□ -0.82
HERC2-201ENST00000261609 ZBTB47Q9UFB7 747 aaPredicted RBP9.91□□□□□ -0.82
HERC2-201ENST00000261609 SLC4A1APQ9BWU0 796 aaKnown RBP9.84□□□□□ -0.83
HERC2-201ENST00000261609 FAM50AQ14320 339 aaKnown RBP9.82□□□□□ -0.84
HERC2-201ENST00000261609 TNNT2P45379 298 aaPredicted RBP9.81□□□□□ -0.84
HERC2-201ENST00000261609 TRIM52Q96A61 297 aa9.77□□□□□ -0.85
HERC2-201ENST00000261609 MIER1Q8N108 512 aa9.76□□□□□ -0.85
HERC2-201ENST00000261609 CANXP27824 592 aaKnown RBP9.76□□□□□ -0.85
HERC2-201ENST00000261609 RTN4Q9NQC3 1192 aaKnown RBP9.75□□□□□ -0.85
HERC2-201ENST00000261609 ARXQ96QS3 562 aa9.74□□□□□ -0.85
HERC2-201ENST00000261609 ERICH6BQ5W0A0 696 aa9.72□□□□□ -0.85
HERC2-201ENST00000261609 SLC24A1O60721 1099 aa9.72□□□□□ -0.85
HERC2-201ENST00000261609 HSP90AA1P07900 732 aaKnown RBP9.71□□□□□ -0.86
HERC2-201ENST00000261609 DEKP35659 375 aaKnown RBP9.7□□□□□ -0.86
HERC2-201ENST00000261609 CCDC136Q96JN2 1154 aa9.7□□□□□ -0.86
HERC2-201ENST00000261609 NAP1L5Q96NT1 182 aaPredicted RBP9.68□□□□□ -0.86
HERC2-201ENST00000261609 UPF2Q9HAU5 1272 aaKnown RBP9.67□□□□□ -0.86
HERC2-201ENST00000261609 DCAF1Q9Y4B6 1507 aa9.67□□□□□ -0.86
HERC2-201ENST00000261609 NEFMP07197 916 aa9.67□□□□□ -0.86
HERC2-201ENST00000261609 HNRNPUQ00839 825 aaKnown RBP eCLIP9.67□□□□□ -0.86
HERC2-201ENST00000261609 ZNF326Q5BKZ1 582 aaKnown RBP9.67□□□□□ -0.86
HERC2-201ENST00000261609 PRKCSHP14314 528 aaPredicted RBP9.66□□□□□ -0.86
HERC2-201ENST00000261609 DDX10Q13206 875 aaKnown RBP9.66□□□□□ -0.86
HERC2-201ENST00000261609 DDRGK1Q96HY6 314 aa9.65□□□□□ -0.87
HERC2-201ENST00000261609 IRX6P78412 446 aaPredicted RBP9.64□□□□□ -0.87
HERC2-201ENST00000261609 TRIM44Q96DX7 344 aaPredicted RBP9.64□□□□□ -0.87
HERC2-201ENST00000261609 CSRNP3Q8WYN3 585 aa9.62□□□□□ -0.87
HERC2-201ENST00000261609 NOP58Q9Y2X3 529 aaKnown RBP9.6□□□□□ -0.87
HERC2-201ENST00000261609 FAM9BQ8IZU0 186 aa9.6□□□□□ -0.87
HERC2-201ENST00000261609 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.59□□□□□ -0.87
HERC2-201ENST00000261609 PPM1GO15355 546 aaPredicted RBP9.59□□□□□ -0.88
HERC2-201ENST00000261609 NCLP19338 710 aaKnown RBP9.58□□□□□ -0.88
HERC2-201ENST00000261609 BECN1Q14457 450 aa9.57□□□□□ -0.88
HERC2-201ENST00000261609 LAS1LQ9Y4W2 734 aaKnown RBP9.57□□□□□ -0.88
HERC2-201ENST00000261609 SUPT16HQ9Y5B9 1047 aaKnown RBP9.56□□□□□ -0.88
HERC2-201ENST00000261609 RBM19Q9Y4C8 960 aaKnown RBP9.56□□□□□ -0.88
HERC2-201ENST00000261609 CDK11BP21127 795 aaKnown RBP9.54□□□□□ -0.88
HERC2-201ENST00000261609 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.54□□□□□ -0.88
HERC2-201ENST00000261609 SALL2Q9Y467 1007 aaPredicted RBP9.52□□□□□ -0.89
HERC2-201ENST00000261609 TONSLQ96HA7 1378 aa9.52□□□□□ -0.89
HERC2-201ENST00000261609 PTMAP06454 111 aaKnown RBP9.5□□□□□ -0.89
HERC2-201ENST00000261609 PPP4R2Q9NY27 417 aa9.49□□□□□ -0.89
HERC2-201ENST00000261609 TMC1Q8TDI8 760 aa9.48□□□□□ -0.89
HERC2-201ENST00000261609 AMER1Q5JTC6 1135 aaPredicted RBP9.48□□□□□ -0.89
HERC2-201ENST00000261609 DNTTIP2Q5QJE6 756 aaKnown RBP9.47□□□□□ -0.89
HERC2-201ENST00000261609 GOLGA6L22H0YM25 854 aa9.46□□□□□ -0.89
HERC2-201ENST00000261609 MRS2Q9HD23 443 aa9.46□□□□□ -0.9
HERC2-201ENST00000261609 TSHZ2Q9NRE2 1034 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms