RNA–Protein interactions for RNA: ENST00000483457.1

EEFSEC-202, Transcript of eukaryotic elongation factor, selenocysteine-tRNA specific, humanhuman

TSL 5 BASIC

Gene EEFSEC, Length 1,859 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEFSEC-202ENST00000483457 NISCHQ9Y2I1 1504 aa35.58■■■■□ 3.29
EEFSEC-202ENST00000483457 CCDC180Q9P1Z9 1646 aa31.36■■■□□ 2.61
EEFSEC-202ENST00000483457 ABCC9O60706 1549 aa30.7■■■□□ 2.51
EEFSEC-202ENST00000483457 DCAF8L2P0C7V8 631 aa29.93■■■□□ 2.38
EEFSEC-202ENST00000483457 ZCCHC6Q5VYS8 1495 aaKnown RBP29.77■■■□□ 2.36
EEFSEC-202ENST00000483457 NACADO15069 1562 aa29.53■■■□□ 2.32
EEFSEC-202ENST00000483457 RB1CC1Q8TDY2 1594 aa29.52■■■□□ 2.32
EEFSEC-202ENST00000483457 MYO15BQ96JP2 1530 aa29.39■■■□□ 2.3
EEFSEC-202ENST00000483457 SHROOM4Q9ULL8 1493 aa29.38■■■□□ 2.29
EEFSEC-202ENST00000483457 DCAF1Q9Y4B6 1507 aa29.37■■■□□ 2.29
EEFSEC-202ENST00000483457 SUPT5HO00267 1087 aaKnown RBP28.84■■■□□ 2.21
EEFSEC-202ENST00000483457 PABPN1Q86U42 306 aaKnown RBP eCLIP28.84■■■□□ 2.21
EEFSEC-202ENST00000483457 SCRIBQ14160 1630 aa28.79■■■□□ 2.2
EEFSEC-202ENST00000483457 UNC13AQ9UPW8 1703 aa28.71■■■□□ 2.19
EEFSEC-202ENST00000483457 BICRAQ9NZM4 1560 aa28.59■■■□□ 2.17
EEFSEC-202ENST00000483457 CHIC1Q5VXU3 224 aa28.24■■■□□ 2.11
EEFSEC-202ENST00000483457 DNAJC5BQ9UF47 199 aa28.02■■■□□ 2.08
EEFSEC-202ENST00000483457 EIF4G1Q04637 1599 aaKnown RBP27.85■■■□□ 2.05
EEFSEC-202ENST00000483457 CECR2Q9BXF3 1484 aa27.75■■■□□ 2.03
EEFSEC-202ENST00000483457 RSF1Q96T23 1441 aaPredicted RBP27.7■■■□□ 2.03
EEFSEC-202ENST00000483457 CC2D2AQ9P2K1 1620 aa27.68■■■□□ 2.02
EEFSEC-202ENST00000483457 BAZ1AQ9NRL2 1556 aaPredicted RBP27.54■■■□□ 2
EEFSEC-202ENST00000483457 SMARCA4P51532 1647 aa27.5■■□□□ 1.99
EEFSEC-202ENST00000483457 MROH2BQ7Z745 1585 aa27.45■■□□□ 1.98
EEFSEC-202ENST00000483457 ATAD2BQ9ULI0 1458 aa27.37■■□□□ 1.97
EEFSEC-202ENST00000483457 NCAPD3P42695 1498 aa27.31■■□□□ 1.96
EEFSEC-202ENST00000483457 HRCP23327 699 aa27.31■■□□□ 1.96
EEFSEC-202ENST00000483457 SMARCA2P51531 1590 aa27.3■■□□□ 1.96
EEFSEC-202ENST00000483457 PEG3Q9GZU2 1588 aa27.19■■□□□ 1.94
EEFSEC-202ENST00000483457 BAZ1BQ9UIG0 1483 aaKnown RBP27.16■■□□□ 1.94
EEFSEC-202ENST00000483457 LOC105371045A0A1W2PR82 267 aa27.15■■□□□ 1.94
EEFSEC-202ENST00000483457 WIZO95785 1651 aa27.12■■□□□ 1.93
EEFSEC-202ENST00000483457 HMGXB3Q12766 1538 aa27.11■■□□□ 1.93
EEFSEC-202ENST00000483457 PCGF6Q9BYE7 350 aa27.11■■□□□ 1.93
EEFSEC-202ENST00000483457 TRIM41Q8WV44 630 aa27.08■■□□□ 1.93
EEFSEC-202ENST00000483457 TRIM26Q12899 539 aaPredicted RBP26.91■■□□□ 1.9
EEFSEC-202ENST00000483457 TOP2AP11388 1531 aaKnown RBP26.84■■□□□ 1.89
EEFSEC-202ENST00000483457 NESP48681 1621 aa26.62■■□□□ 1.85
EEFSEC-202ENST00000483457 CCDC88BA6NC98 1476 aa26.6■■□□□ 1.85
EEFSEC-202ENST00000483457 CADPSQ9ULU8 1353 aa26.58■■□□□ 1.85
EEFSEC-202ENST00000483457 FAM9AQ8IZU1 332 aaPredicted RBP26.55■■□□□ 1.84
EEFSEC-202ENST00000483457 LAMC3Q9Y6N6 1575 aa26.48■■□□□ 1.83
EEFSEC-202ENST00000483457 ZEB1P37275 1124 aaPredicted RBP26.48■■□□□ 1.83
EEFSEC-202ENST00000483457 ERCC6Q03468 1493 aa26.45■■□□□ 1.82
EEFSEC-202ENST00000483457 CFTRP13569 1480 aa26.42■■□□□ 1.82
EEFSEC-202ENST00000483457 PDS5BQ9NTI5 1447 aa26.41■■□□□ 1.82
EEFSEC-202ENST00000483457 PPARGC1BQ86YN6 1023 aaKnown RBP26.36■■□□□ 1.81
EEFSEC-202ENST00000483457 EEA1Q15075 1411 aa26.33■■□□□ 1.8
EEFSEC-202ENST00000483457 ABCC8Q09428 1581 aa26.31■■□□□ 1.8
EEFSEC-202ENST00000483457 FANCD2Q9BXW9 1451 aa26.25■■□□□ 1.79
EEFSEC-202ENST00000483457 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
EEFSEC-202ENST00000483457 WRNQ14191 1432 aaPredicted RBP eCLIP26.17■■□□□ 1.78
EEFSEC-202ENST00000483457 KIF21AQ7Z4S6 1674 aa26.17■■□□□ 1.78
EEFSEC-202ENST00000483457 TNIKQ9UKE5 1360 aa26.11■■□□□ 1.77
EEFSEC-202ENST00000483457 EHMT2Q96KQ7 1210 aa26.08■■□□□ 1.77
EEFSEC-202ENST00000483457 MRC2Q9UBG0 1479 aa26.07■■□□□ 1.76
EEFSEC-202ENST00000483457 SOGA1O94964 1423 aa26.05■■□□□ 1.76
EEFSEC-202ENST00000483457 CEP162Q5TB80 1403 aa26.02■■□□□ 1.76
EEFSEC-202ENST00000483457 THOC2Q8NI27 1593 aaKnown RBP26.02■■□□□ 1.76
EEFSEC-202ENST00000483457 PRDM2Q13029 1718 aa26.01■■□□□ 1.75
EEFSEC-202ENST00000483457 CSRNP3Q8WYN3 585 aa26■■□□□ 1.75
EEFSEC-202ENST00000483457 CUX2O14529 1486 aa25.97■■□□□ 1.75
EEFSEC-202ENST00000483457 GOLGA3Q08378 1498 aa25.96■■□□□ 1.75
EEFSEC-202ENST00000483457 URB2Q14146 1524 aaKnown RBP25.94■■□□□ 1.74
EEFSEC-202ENST00000483457 WDR62O43379 1518 aa25.92■■□□□ 1.74
EEFSEC-202ENST00000483457 KIF21BO75037 1637 aa25.9■■□□□ 1.74
EEFSEC-202ENST00000483457 SYNJ1O43426 1573 aa25.88■■□□□ 1.73
EEFSEC-202ENST00000483457 RUSC2Q8N2Y8 1516 aa25.87■■□□□ 1.73
EEFSEC-202ENST00000483457 TOPBP1Q92547 1522 aa25.83■■□□□ 1.73
EEFSEC-202ENST00000483457 DNMBPQ6XZF7 1577 aa25.77■■□□□ 1.72
EEFSEC-202ENST00000483457 UBTFP17480 764 aaKnown RBP25.74■■□□□ 1.71
EEFSEC-202ENST00000483457 TOP2BQ02880 1626 aa25.73■■□□□ 1.71
EEFSEC-202ENST00000483457 CUX1P39880 1505 aa25.72■■□□□ 1.71
EEFSEC-202ENST00000483457 BIVM-ERCC5R4GMW8 1640 aa25.7■■□□□ 1.7
EEFSEC-202ENST00000483457 POLA1P09884 1462 aaPredicted RBP25.63■■□□□ 1.69
EEFSEC-202ENST00000483457 FGD5Q6ZNL6 1462 aa25.62■■□□□ 1.69
EEFSEC-202ENST00000483457 IFT140Q96RY7 1462 aa25.62■■□□□ 1.69
EEFSEC-202ENST00000483457 CCER1Q8TC90 406 aaPredicted RBP25.62■■□□□ 1.69
EEFSEC-202ENST00000483457 RAD54L2Q9Y4B4 1467 aa25.58■■□□□ 1.68
EEFSEC-202ENST00000483457 CLIP1P30622 1438 aa25.57■■□□□ 1.68
EEFSEC-202ENST00000483457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.55■■□□□ 1.68
EEFSEC-202ENST00000483457 ERICH3Q5RHP9 1530 aa25.53■■□□□ 1.68
EEFSEC-202ENST00000483457 VPS8Q8N3P4 1428 aa25.52■■□□□ 1.68
EEFSEC-202ENST00000483457 ZNF608Q9ULD9 1512 aaPredicted RBP25.51■■□□□ 1.67
EEFSEC-202ENST00000483457 RAPGEF2Q9Y4G8 1499 aa25.48■■□□□ 1.67
EEFSEC-202ENST00000483457 TDRD9Q8NDG6 1382 aaKnown RBP25.47■■□□□ 1.67
EEFSEC-202ENST00000483457 TARBP1Q13395 1621 aaKnown RBP25.46■■□□□ 1.67
EEFSEC-202ENST00000483457 AQRO60306 1485 aaKnown RBP eCLIP25.44■■□□□ 1.667e-15■■■■■ 75.7
EEFSEC-202ENST00000483457 PRXQ9BXM0 1461 aa25.41■■□□□ 1.66
EEFSEC-202ENST00000483457 ABCA10Q8WWZ4 1543 aa25.36■■□□□ 1.65
EEFSEC-202ENST00000483457 EIF4G3O43432 1585 aaKnown RBP25.32■■□□□ 1.64
EEFSEC-202ENST00000483457 APLP2Q06481 763 aa25.3■■□□□ 1.64
EEFSEC-202ENST00000483457 KIF27Q86VH2 1401 aa25.3■■□□□ 1.64
EEFSEC-202ENST00000483457 TTBK1Q5TCY1 1321 aaPredicted RBP25.28■■□□□ 1.64
EEFSEC-202ENST00000483457 GAPVD1Q14C86 1478 aa25.27■■□□□ 1.64
EEFSEC-202ENST00000483457 GRIN2BQ13224 1484 aa25.22■■□□□ 1.63
EEFSEC-202ENST00000483457 WDR97A6NE52 1622 aa25.22■■□□□ 1.63
EEFSEC-202ENST00000483457 FBLN2P98095 1184 aa25.21■■□□□ 1.63
EEFSEC-202ENST00000483457 ARAP1Q96P48 1450 aa25.17■■□□□ 1.62
EEFSEC-202ENST00000483457 SNAPC4Q5SXM2 1469 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms