RNA–Protein interactions for RNA: ENST00000415807.6

FNDC3B-202, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 5,083 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-202ENST00000415807 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
FNDC3B-202ENST00000415807 DCAF8L2P0C7V8 631 aa21.43■■□□□ 1.02
FNDC3B-202ENST00000415807 SHROOM4Q9ULL8 1493 aa20.91■□□□□ 0.94
FNDC3B-202ENST00000415807 SUPT5HO00267 1087 aaKnown RBP20.61■□□□□ 0.89
FNDC3B-202ENST00000415807 EHMT2Q96KQ7 1210 aa19.54■□□□□ 0.72
FNDC3B-202ENST00000415807 ABCC9O60706 1549 aa19.49■□□□□ 0.71
FNDC3B-202ENST00000415807 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
FNDC3B-202ENST00000415807 CCDC180Q9P1Z9 1646 aa19.31■□□□□ 0.68
FNDC3B-202ENST00000415807 FAM9AQ8IZU1 332 aaPredicted RBP19.28■□□□□ 0.68
FNDC3B-202ENST00000415807 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.65
FNDC3B-202ENST00000415807 PABPN1Q86U42 306 aaKnown RBP eCLIP19■□□□□ 0.63
FNDC3B-202ENST00000415807 TRIM41Q8WV44 630 aa19■□□□□ 0.63
FNDC3B-202ENST00000415807 SCRIBQ14160 1630 aa18.92■□□□□ 0.62
FNDC3B-202ENST00000415807 LOC105371045A0A1W2PR82 267 aa18.91■□□□□ 0.62
FNDC3B-202ENST00000415807 PCGF6Q9BYE7 350 aa18.83■□□□□ 0.6
FNDC3B-202ENST00000415807 TTBK1Q5TCY1 1321 aaPredicted RBP18.74■□□□□ 0.59
FNDC3B-202ENST00000415807 RANGAP1P46060 587 aaPredicted RBP18.64■□□□□ 0.57
FNDC3B-202ENST00000415807 PPARGC1BQ86YN6 1023 aaKnown RBP18.61■□□□□ 0.57
FNDC3B-202ENST00000415807 DCAF1Q9Y4B6 1507 aa18.5■□□□□ 0.55
FNDC3B-202ENST00000415807 UBTFP17480 764 aaKnown RBP18.45■□□□□ 0.54
FNDC3B-202ENST00000415807 RSF1Q96T23 1441 aaPredicted RBP18.43■□□□□ 0.54
FNDC3B-202ENST00000415807 CECR2Q9BXF3 1484 aa18.38■□□□□ 0.53
FNDC3B-202ENST00000415807 MYO15BQ96JP2 1530 aa18.38■□□□□ 0.53
FNDC3B-202ENST00000415807 NACADO15069 1562 aa18.36■□□□□ 0.53
FNDC3B-202ENST00000415807 RB1CC1Q8TDY2 1594 aa18.33■□□□□ 0.52
FNDC3B-202ENST00000415807 APLP2Q06481 763 aa18.2■□□□□ 0.5
FNDC3B-202ENST00000415807 TRIM26Q12899 539 aaPredicted RBP18.13■□□□□ 0.49
FNDC3B-202ENST00000415807 MROH2BQ7Z745 1585 aa18.12■□□□□ 0.49
FNDC3B-202ENST00000415807 ATP1B4Q9UN42 357 aaPredicted RBP18.05■□□□□ 0.48
FNDC3B-202ENST00000415807 HRCP23327 699 aa18.01■□□□□ 0.47
FNDC3B-202ENST00000415807 CCER1Q8TC90 406 aaPredicted RBP17.98■□□□□ 0.47
FNDC3B-202ENST00000415807 WIZO95785 1651 aa17.94■□□□□ 0.46
FNDC3B-202ENST00000415807 BAZ1AQ9NRL2 1556 aaPredicted RBP17.92■□□□□ 0.46
FNDC3B-202ENST00000415807 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
FNDC3B-202ENST00000415807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.83■□□□□ 0.44
FNDC3B-202ENST00000415807 HNRNPUL2Q1KMD3 747 aaKnown RBP17.82■□□□□ 0.44
FNDC3B-202ENST00000415807 ITGAEP38570 1179 aa17.77■□□□□ 0.44
FNDC3B-202ENST00000415807 CCDC88BA6NC98 1476 aa17.76■□□□□ 0.43
FNDC3B-202ENST00000415807 BAZ1BQ9UIG0 1483 aaKnown RBP17.74■□□□□ 0.43
FNDC3B-202ENST00000415807 ABCC8Q09428 1581 aa17.72■□□□□ 0.43
FNDC3B-202ENST00000415807 ZEB1P37275 1124 aaPredicted RBP17.69■□□□□ 0.42
FNDC3B-202ENST00000415807 P3H3Q8IVL6 736 aa17.64■□□□□ 0.41
FNDC3B-202ENST00000415807 SOGA1O94964 1423 aa17.63■□□□□ 0.41
FNDC3B-202ENST00000415807 WRNQ14191 1432 aaPredicted RBP eCLIP17.63■□□□□ 0.41
FNDC3B-202ENST00000415807 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
FNDC3B-202ENST00000415807 TOP2AP11388 1531 aaKnown RBP17.55■□□□□ 0.4
FNDC3B-202ENST00000415807 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
FNDC3B-202ENST00000415807 CEP162Q5TB80 1403 aa17.45■□□□□ 0.38
FNDC3B-202ENST00000415807 RUSC2Q8N2Y8 1516 aa17.44■□□□□ 0.38
FNDC3B-202ENST00000415807 ARID3CA6NKF2 412 aa17.43■□□□□ 0.38
FNDC3B-202ENST00000415807 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
FNDC3B-202ENST00000415807 FBLN2P98095 1184 aa17.39■□□□□ 0.37
FNDC3B-202ENST00000415807 FAM50AQ14320 339 aaKnown RBP17.38■□□□□ 0.37
FNDC3B-202ENST00000415807 BICRAQ9NZM4 1560 aa17.37■□□□□ 0.37
FNDC3B-202ENST00000415807 CLIP1P30622 1438 aa17.36■□□□□ 0.37
FNDC3B-202ENST00000415807 GOLGA3Q08378 1498 aa17.33■□□□□ 0.36
FNDC3B-202ENST00000415807 UNC13AQ9UPW8 1703 aa17.31■□□□□ 0.36
FNDC3B-202ENST00000415807 YTHDC1Q96MU7 727 aaKnown RBP17.31■□□□□ 0.36
FNDC3B-202ENST00000415807 TNIKQ9UKE5 1360 aa17.31■□□□□ 0.36
FNDC3B-202ENST00000415807 EEA1Q15075 1411 aa17.29■□□□□ 0.36
FNDC3B-202ENST00000415807 CEP164Q9UPV0 1460 aa17.22■□□□□ 0.35
FNDC3B-202ENST00000415807 KIF27Q86VH2 1401 aa17.21■□□□□ 0.35
FNDC3B-202ENST00000415807 EIF4G1Q04637 1599 aaKnown RBP17.2■□□□□ 0.34
FNDC3B-202ENST00000415807 CUX2O14529 1486 aa17.17■□□□□ 0.34
FNDC3B-202ENST00000415807 NEUROD1Q13562 356 aa17.15■□□□□ 0.34
FNDC3B-202ENST00000415807 DIEXFQ68CQ4 756 aaKnown RBP17.14■□□□□ 0.33
FNDC3B-202ENST00000415807 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
FNDC3B-202ENST00000415807 RAPGEF2Q9Y4G8 1499 aa17.13■□□□□ 0.33
FNDC3B-202ENST00000415807 DNAJC5BQ9UF47 199 aa17.13■□□□□ 0.33
FNDC3B-202ENST00000415807 NCAPD3P42695 1498 aa17.09■□□□□ 0.33
FNDC3B-202ENST00000415807 CARMIL1Q5VZK9 1371 aa17.06■□□□□ 0.32
FNDC3B-202ENST00000415807 TDRD9Q8NDG6 1382 aaKnown RBP17.06■□□□□ 0.32
FNDC3B-202ENST00000415807 KANK4Q5T7N3 995 aaPredicted RBP17.06■□□□□ 0.32
FNDC3B-202ENST00000415807 SYNJ1O43426 1573 aa17.05■□□□□ 0.32
FNDC3B-202ENST00000415807 TRIM52Q96A61 297 aa17.01■□□□□ 0.31
FNDC3B-202ENST00000415807 CENPBP07199 599 aaPredicted RBP17■□□□□ 0.31
FNDC3B-202ENST00000415807 CHIC2Q9UKJ5 165 aa16.96■□□□□ 0.31
FNDC3B-202ENST00000415807 NESP48681 1621 aa16.96■□□□□ 0.31
FNDC3B-202ENST00000415807 VPS8Q8N3P4 1428 aa16.95■□□□□ 0.3
FNDC3B-202ENST00000415807 ZNF777Q9ULD5 760 aaPredicted RBP16.95■□□□□ 0.3
FNDC3B-202ENST00000415807 FANCD2Q9BXW9 1451 aa16.95■□□□□ 0.3
FNDC3B-202ENST00000415807 CNGB1Q14028 1251 aaPredicted RBP16.95■□□□□ 0.3
FNDC3B-202ENST00000415807 CHMP7Q8WUX9 453 aaPredicted RBP16.94■□□□□ 0.3
FNDC3B-202ENST00000415807 ZNF316A6NFI3 1004 aaPredicted RBP16.94■□□□□ 0.3
FNDC3B-202ENST00000415807 CC2D2AQ9P2K1 1620 aa16.92■□□□□ 0.3
FNDC3B-202ENST00000415807 RAD54L2Q9Y4B4 1467 aa16.9■□□□□ 0.3
FNDC3B-202ENST00000415807 MYT1LQ9UL68 1186 aa16.9■□□□□ 0.3
FNDC3B-202ENST00000415807 MTUS2Q5JR59 1369 aa16.89■□□□□ 0.29
FNDC3B-202ENST00000415807 CFTRP13569 1480 aa16.89■□□□□ 0.29
FNDC3B-202ENST00000415807 POLR3GLQ9BT43 218 aa16.88■□□□□ 0.29
FNDC3B-202ENST00000415807 FGD5Q6ZNL6 1462 aa16.87■□□□□ 0.29
FNDC3B-202ENST00000415807 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
FNDC3B-202ENST00000415807 IGF1RP08069 1367 aa16.86■□□□□ 0.29
FNDC3B-202ENST00000415807 PDS5BQ9NTI5 1447 aa16.86■□□□□ 0.29
FNDC3B-202ENST00000415807 PEG3Q9GZU2 1588 aa16.84■□□□□ 0.29
FNDC3B-202ENST00000415807 CUX1P39880 1505 aa16.84■□□□□ 0.29
FNDC3B-202ENST00000415807 HMGXB3Q12766 1538 aa16.82■□□□□ 0.28
FNDC3B-202ENST00000415807 RRP7BPQ9NSQ0 103 aa16.8■□□□□ 0.28
FNDC3B-202ENST00000415807 HIRIP3Q9BW71 556 aaPredicted RBP16.79■□□□□ 0.28
FNDC3B-202ENST00000415807 FHOD3Q2V2M9 1422 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms