RNA–Protein interactions for RNA: ENST00000471555.5

ATP11A-210, Transcript of ATPase phospholipid transporting 11A, humanhuman

TSL 1 (best)

Gene ATP11A, Length 5,786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11A-210ENST00000471555 DCAF8L2P0C7V8 631 aa19.26■□□□□ 0.67
ATP11A-210ENST00000471555 NISCHQ9Y2I1 1504 aa18.15■□□□□ 0.5
ATP11A-210ENST00000471555 PELP1Q8IZL8 1130 aaKnown RBP18.15■□□□□ 0.5
ATP11A-210ENST00000471555 SUPT5HO00267 1087 aaKnown RBP18.08■□□□□ 0.49
ATP11A-210ENST00000471555 APLP2Q06481 763 aa17.77■□□□□ 0.44
ATP11A-210ENST00000471555 FAM9AQ8IZU1 332 aaPredicted RBP17.74■□□□□ 0.43
ATP11A-210ENST00000471555 EHMT2Q96KQ7 1210 aa17.68■□□□□ 0.42
ATP11A-210ENST00000471555 SHROOM4Q9ULL8 1493 aa17.54■□□□□ 0.4
ATP11A-210ENST00000471555 ERICH6Q7L0X2 663 aa17.34■□□□□ 0.37
ATP11A-210ENST00000471555 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
ATP11A-210ENST00000471555 TTBK1Q5TCY1 1321 aaPredicted RBP17.13■□□□□ 0.33
ATP11A-210ENST00000471555 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
ATP11A-210ENST00000471555 PCGF6Q9BYE7 350 aa17.02■□□□□ 0.32
ATP11A-210ENST00000471555 ATP1B4Q9UN42 357 aaPredicted RBP17.02■□□□□ 0.32
ATP11A-210ENST00000471555 RANGAP1P46060 587 aaPredicted RBP16.99■□□□□ 0.31
ATP11A-210ENST00000471555 ZEB1P37275 1124 aaPredicted RBP16.96■□□□□ 0.31
ATP11A-210ENST00000471555 NEFLP07196 543 aa16.93■□□□□ 0.3
ATP11A-210ENST00000471555 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
ATP11A-210ENST00000471555 UBTFP17480 764 aaKnown RBP16.76■□□□□ 0.27
ATP11A-210ENST00000471555 DAXXQ9UER7 740 aaPredicted RBP16.63■□□□□ 0.25
ATP11A-210ENST00000471555 MYT1Q01538 1121 aa16.62■□□□□ 0.25
ATP11A-210ENST00000471555 MYT1LQ9UL68 1186 aa16.6■□□□□ 0.25
ATP11A-210ENST00000471555 YTHDC1Q96MU7 727 aaKnown RBP16.57■□□□□ 0.24
ATP11A-210ENST00000471555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
ATP11A-210ENST00000471555 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
ATP11A-210ENST00000471555 POLR3GLQ9BT43 218 aa16.41■□□□□ 0.22
ATP11A-210ENST00000471555 ITGAEP38570 1179 aa16.26■□□□□ 0.19
ATP11A-210ENST00000471555 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
ATP11A-210ENST00000471555 PPARGC1BQ86YN6 1023 aaKnown RBP16.22■□□□□ 0.19
ATP11A-210ENST00000471555 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
ATP11A-210ENST00000471555 ZNF316A6NFI3 1004 aaPredicted RBP16.18■□□□□ 0.18
ATP11A-210ENST00000471555 TRIM26Q12899 539 aaPredicted RBP16.17■□□□□ 0.18
ATP11A-210ENST00000471555 CLSPNQ9HAW4 1339 aa16.16■□□□□ 0.18
ATP11A-210ENST00000471555 CNGB1Q14028 1251 aaPredicted RBP16.13■□□□□ 0.17
ATP11A-210ENST00000471555 RTL5Q5HYW3 569 aaPredicted RBP16.1■□□□□ 0.17
ATP11A-210ENST00000471555 HRCP23327 699 aa15.98■□□□□ 0.15
ATP11A-210ENST00000471555 ZBTB47Q9UFB7 747 aaPredicted RBP15.97■□□□□ 0.15
ATP11A-210ENST00000471555 TRIM52Q96A61 297 aa15.87■□□□□ 0.13
ATP11A-210ENST00000471555 FAM50AQ14320 339 aaKnown RBP15.85■□□□□ 0.13
ATP11A-210ENST00000471555 ABCC9O60706 1549 aa15.81■□□□□ 0.12
ATP11A-210ENST00000471555 NEFMP07197 916 aa15.77■□□□□ 0.12
ATP11A-210ENST00000471555 SLC24A1O60721 1099 aa15.76■□□□□ 0.11
ATP11A-210ENST00000471555 CANXP27824 592 aaKnown RBP15.72■□□□□ 0.11
ATP11A-210ENST00000471555 DIEXFQ68CQ4 756 aaKnown RBP15.72■□□□□ 0.11
ATP11A-210ENST00000471555 LOC105371045A0A1W2PR82 267 aa15.69■□□□□ 0.1
ATP11A-210ENST00000471555 ZNF326Q5BKZ1 582 aaKnown RBP15.69■□□□□ 0.1
ATP11A-210ENST00000471555 BCANQ96GW7 911 aa15.69■□□□□ 0.1
ATP11A-210ENST00000471555 NEUROD1Q13562 356 aa15.68■□□□□ 0.1
ATP11A-210ENST00000471555 ANP32CO43423 234 aa15.68■□□□□ 0.1
ATP11A-210ENST00000471555 CDK11AQ9UQ88 783 aaPredicted RBP15.65■□□□□ 0.1
ATP11A-210ENST00000471555 BCL11AQ9H165 835 aa15.59■□□□□ 0.09
ATP11A-210ENST00000471555 FBLN2P98095 1184 aa15.58■□□□□ 0.08
ATP11A-210ENST00000471555 CCDC180Q9P1Z9 1646 aa15.52■□□□□ 0.07
ATP11A-210ENST00000471555 ESF1Q9H501 851 aaKnown RBP15.51■□□□□ 0.07
ATP11A-210ENST00000471555 ANP32BQ92688 251 aaKnown RBP15.46■□□□□ 0.07
ATP11A-210ENST00000471555 ANP32AP39687 249 aaKnown RBP15.45■□□□□ 0.06
ATP11A-210ENST00000471555 PABPN1Q86U42 306 aaKnown RBP eCLIP15.39■□□□□ 0.05
ATP11A-210ENST00000471555 HSP90AA1P07900 732 aaKnown RBP15.38■□□□□ 0.05
ATP11A-210ENST00000471555 STAG3Q9UJ98 1225 aa15.38■□□□□ 0.05
ATP11A-210ENST00000471555 ZNF777Q9ULD5 760 aaPredicted RBP15.34■□□□□ 0.05
ATP11A-210ENST00000471555 UPF2Q9HAU5 1272 aaKnown RBP15.34■□□□□ 0.05
ATP11A-210ENST00000471555 GTF3C3Q9Y5Q9 886 aa15.34■□□□□ 0.05
ATP11A-210ENST00000471555 NPM2Q86SE8 214 aaKnown RBP15.3■□□□□ 0.04
ATP11A-210ENST00000471555 ARID3CA6NKF2 412 aa15.29■□□□□ 0.04
ATP11A-210ENST00000471555 CHGAP10645 457 aaKnown RBP15.28■□□□□ 0.04
ATP11A-210ENST00000471555 NPM1P06748 294 aaKnown RBP eCLIP15.25■□□□□ 0.03
ATP11A-210ENST00000471555 P3H3Q8IVL6 736 aa15.25■□□□□ 0.03
ATP11A-210ENST00000471555 CDK11BP21127 795 aaKnown RBP15.22■□□□□ 0.03
ATP11A-210ENST00000471555 PLPPR3Q6T4P5 718 aa15.2■□□□□ 0.02
ATP11A-210ENST00000471555 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.17■□□□□ 0.02
ATP11A-210ENST00000471555 TONSLQ96HA7 1378 aa15.16■□□□□ 0.02
ATP11A-210ENST00000471555 EIF5BO60841 1220 aaKnown RBP15.14■□□□□ 0.01
ATP11A-210ENST00000471555 GLIPR1L2Q4G1C9 344 aa15.12■□□□□ 0.01
ATP11A-210ENST00000471555 CSRNP3Q8WYN3 585 aa15.1■□□□□ 0.01
ATP11A-210ENST00000471555 SCAF1Q9H7N4 1312 aaKnown RBP15.09■□□□□ 0.01
ATP11A-210ENST00000471555 MYH16Q9H6N6 1097 aa15.09■□□□□ 0.01
ATP11A-210ENST00000471555 WDR43Q15061 677 aaKnown RBP eCLIP15.08■□□□□ 0.01
ATP11A-210ENST00000471555 HNRNPUQ00839 825 aaKnown RBP eCLIP15.06■□□□□ 0
ATP11A-210ENST00000471555 A0A0G2JS52 829 aa15.05■□□□□ 0
ATP11A-210ENST00000471555 FKBP8Q14318 412 aa15.05■□□□□ -0
ATP11A-210ENST00000471555 FAM9BQ8IZU0 186 aa15.04■□□□□ -0
ATP11A-210ENST00000471555 ACIN1Q9UKV3 1341 aaKnown RBP15.04■□□□□ -0
ATP11A-210ENST00000471555 TMC1Q8TDI8 760 aa15.04■□□□□ -0
ATP11A-210ENST00000471555 ZCCHC6Q5VYS8 1495 aaKnown RBP15.03■□□□□ -0
ATP11A-210ENST00000471555 RB1CC1Q8TDY2 1594 aa15.01□□□□□ -0.01
ATP11A-210ENST00000471555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.01□□□□□ -0.011e-7■□□□□ 10.5
ATP11A-210ENST00000471555 CCDC136Q96JN2 1154 aa15.01□□□□□ -0.01
ATP11A-210ENST00000471555 SALL2Q9Y467 1007 aaPredicted RBP15□□□□□ -0.01
ATP11A-210ENST00000471555 TSPY4P0CV99 314 aa14.97□□□□□ -0.01
ATP11A-210ENST00000471555 TSPY10P0CW01 314 aa14.97□□□□□ -0.01
ATP11A-210ENST00000471555 NCLP19338 710 aaKnown RBP14.96□□□□□ -0.01
ATP11A-210ENST00000471555 NACADO15069 1562 aa14.95□□□□□ -0.02
ATP11A-210ENST00000471555 ZBTB7CA1YPR0 619 aa14.93□□□□□ -0.02
ATP11A-210ENST00000471555 DDX10Q13206 875 aaKnown RBP14.92□□□□□ -0.02
ATP11A-210ENST00000471555 C14orf37Q86TY3 774 aa14.92□□□□□ -0.02
ATP11A-210ENST00000471555 PPP1R15AO75807 674 aaPredicted RBP14.91□□□□□ -0.02
ATP11A-210ENST00000471555 ARXQ96QS3 562 aa14.9□□□□□ -0.02
ATP11A-210ENST00000471555 CHIC2Q9UKJ5 165 aa14.89□□□□□ -0.03
ATP11A-210ENST00000471555 MRS2Q9HD23 443 aa14.88□□□□□ -0.03
ATP11A-210ENST00000471555 HAP1P54257 671 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms