RNA–Protein interactions for RNA: ENST00000564383.1

HERC2-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 471 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-205ENST00000564383 AEBP2Q6ZN18 517 aaPredicted RBP23.49■■□□□ 1.35
HERC2-205ENST00000564383 CHIC1Q5VXU3 224 aa21.94■■□□□ 1.1
HERC2-205ENST00000564383 SENP3Q9H4L4 574 aaPredicted RBP20.12■□□□□ 0.81
HERC2-205ENST00000564383 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
HERC2-205ENST00000564383 FOXD1Q16676 465 aa18.8■□□□□ 0.6
HERC2-205ENST00000564383 POTEDQ86YR6 584 aa18.24■□□□□ 0.51
HERC2-205ENST00000564383 MSH5O43196 834 aa17.8■□□□□ 0.44
HERC2-205ENST00000564383 PIAS4Q8N2W9 510 aaPredicted RBP17.45■□□□□ 0.38
HERC2-205ENST00000564383 PLPPR3Q6T4P5 718 aa17.19■□□□□ 0.34
HERC2-205ENST00000564383 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
HERC2-205ENST00000564383 ADRA2BP18089 450 aa17.1■□□□□ 0.33
HERC2-205ENST00000564383 DMRT2Q9Y5R5 561 aa15.87■□□□□ 0.13
HERC2-205ENST00000564383 MAPK8IP2Q13387 824 aaPredicted RBP15.85■□□□□ 0.13
HERC2-205ENST00000564383 SCAF1Q9H7N4 1312 aaKnown RBP15.64■□□□□ 0.09
HERC2-205ENST00000564383 CACNB1Q02641 598 aaPredicted RBP15.58■□□□□ 0.08
HERC2-205ENST00000564383 NISCHQ9Y2I1 1504 aa15.53■□□□□ 0.08
HERC2-205ENST00000564383 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
HERC2-205ENST00000564383 RNF39Q9H2S5 420 aa15.15■□□□□ 0.02
HERC2-205ENST00000564383 HOXD11P31277 338 aaPredicted RBP15.09■□□□□ 0.01
HERC2-205ENST00000564383 PPP4R3CPQ6ZMV5 832 aa15□□□□□ -0.01
HERC2-205ENST00000564383 C1QBPQ07021 282 aaKnown RBP14.89□□□□□ -0.03
HERC2-205ENST00000564383 CNKSR2Q8WXI2 1034 aa14.84□□□□□ -0.03
HERC2-205ENST00000564383 RNF216Q9NWF9 866 aaPredicted RBP14.84□□□□□ -0.03
HERC2-205ENST00000564383 DNAJC5BQ9UF47 199 aa14.68□□□□□ -0.06
HERC2-205ENST00000564383 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.36□□□□□ -0.116e-6■□□□□ 8.3
HERC2-205ENST00000564383 NCBP3Q53F19 620 aaKnown RBP14.26□□□□□ -0.13
HERC2-205ENST00000564383 POTEHQ6S545 545 aa14.2□□□□□ -0.14
HERC2-205ENST00000564383 NPM3O75607 178 aaKnown RBP14.06□□□□□ -0.16
HERC2-205ENST00000564383 U3KPZ7 1027 aaPredicted RBP14.02□□□□□ -0.17
HERC2-205ENST00000564383 DSG3P32926 999 aa14.01□□□□□ -0.17
HERC2-205ENST00000564383 SPINK5Q9NQ38 1064 aaPredicted RBP13.97□□□□□ -0.17
HERC2-205ENST00000564383 CAPN15O75808 1086 aa13.96□□□□□ -0.17
HERC2-205ENST00000564383 TRHP20396 242 aaPredicted RBP13.61□□□□□ -0.23
HERC2-205ENST00000564383 ABCB7O75027 752 aa13.59□□□□□ -0.23
HERC2-205ENST00000564383 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
HERC2-205ENST00000564383 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
HERC2-205ENST00000564383 APLP2Q06481 763 aa13.56□□□□□ -0.24
HERC2-205ENST00000564383 CCDC180Q9P1Z9 1646 aa13.46□□□□□ -0.26
HERC2-205ENST00000564383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.43□□□□□ -0.26
HERC2-205ENST00000564383 HNRNPUL2Q1KMD3 747 aaKnown RBP13.43□□□□□ -0.26
HERC2-205ENST00000564383 RBM42Q9BTD8 480 aaKnown RBP13.38□□□□□ -0.27
HERC2-205ENST00000564383 KCNA4P22459 653 aa13.35□□□□□ -0.27
HERC2-205ENST00000564383 SAMD1Q6SPF0 538 aaPredicted RBP13.34□□□□□ -0.27
HERC2-205ENST00000564383 CHRDL2Q6WN34 429 aa13.29□□□□□ -0.28
HERC2-205ENST00000564383 POLA2Q14181 598 aa13.13□□□□□ -0.31
HERC2-205ENST00000564383 SP7Q8TDD2 431 aaPredicted RBP13.07□□□□□ -0.32
HERC2-205ENST00000564383 ZCCHC6Q5VYS8 1495 aaKnown RBP13.05□□□□□ -0.32
HERC2-205ENST00000564383 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
HERC2-205ENST00000564383 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
HERC2-205ENST00000564383 PIP4P2Q8N4L2 257 aa12.87□□□□□ -0.35
HERC2-205ENST00000564383 REM2Q8IYK8 340 aaPredicted RBP12.84□□□□□ -0.35
HERC2-205ENST00000564383 ZBTB12Q9Y330 459 aaPredicted RBP12.83□□□□□ -0.36
HERC2-205ENST00000564383 ABCC9O60706 1549 aa12.83□□□□□ -0.36
HERC2-205ENST00000564383 DCAF1Q9Y4B6 1507 aa12.83□□□□□ -0.36
HERC2-205ENST00000564383 DCAF8L2P0C7V8 631 aa12.79□□□□□ -0.36
HERC2-205ENST00000564383 ATF5Q9Y2D1 282 aaPredicted RBP12.76□□□□□ -0.37
HERC2-205ENST00000564383 HAX1O00165 279 aa12.75□□□□□ -0.37
HERC2-205ENST00000564383 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
HERC2-205ENST00000564383 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
HERC2-205ENST00000564383 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.383e-7■■■□□ 15.4
HERC2-205ENST00000564383 MYO15BQ96JP2 1530 aa12.68□□□□□ -0.38
HERC2-205ENST00000564383 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.38
HERC2-205ENST00000564383 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
HERC2-205ENST00000564383 NACADO15069 1562 aa12.58□□□□□ -0.4
HERC2-205ENST00000564383 EVX2Q03828 476 aa12.57□□□□□ -0.4
HERC2-205ENST00000564383 SLC4A1APQ9BWU0 796 aaKnown RBP12.49□□□□□ -0.41
HERC2-205ENST00000564383 RB1CC1Q8TDY2 1594 aa12.45□□□□□ -0.42
HERC2-205ENST00000564383 SCRIBQ14160 1630 aa12.41□□□□□ -0.42
HERC2-205ENST00000564383 SPDYE2BA6NHP3 402 aa12.4□□□□□ -0.42
HERC2-205ENST00000564383 SPDYE6P0CI01 402 aa12.4□□□□□ -0.42
HERC2-205ENST00000564383 SPDYE2Q495Y8 402 aa12.4□□□□□ -0.42
HERC2-205ENST00000564383 PRKAR2AP13861 404 aaKnown RBP12.37□□□□□ -0.43
HERC2-205ENST00000564383 C19orf67A6NJJ6 358 aa12.32□□□□□ -0.44
HERC2-205ENST00000564383 SPDYE1Q8NFV5 336 aaPredicted RBP12.3□□□□□ -0.44
HERC2-205ENST00000564383 CLEC11AQ9Y240 323 aa12.3□□□□□ -0.44
HERC2-205ENST00000564383 FBLN2P98095 1184 aa12.29□□□□□ -0.44
HERC2-205ENST00000564383 ATXN8OSP0DMR3 200 aa12.28□□□□□ -0.44
HERC2-205ENST00000564383 ZBTB22O15209 634 aa12.27□□□□□ -0.45
HERC2-205ENST00000564383 GABBR2O75899 941 aa12.25□□□□□ -0.45
HERC2-205ENST00000564383 LHX8Q68G74 356 aa12.24□□□□□ -0.45
HERC2-205ENST00000564383 SSUH2Q9Y2M2 353 aa12.19□□□□□ -0.46
HERC2-205ENST00000564383 BICRAQ9NZM4 1560 aa12.15□□□□□ -0.46
HERC2-205ENST00000564383 SUPT5HO00267 1087 aaKnown RBP12.15□□□□□ -0.46
HERC2-205ENST00000564383 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.46
HERC2-205ENST00000564383 ZNF692Q9BU19 519 aaPredicted RBP12.15□□□□□ -0.46
HERC2-205ENST00000564383 UNC13AQ9UPW8 1703 aa12.14□□□□□ -0.47
HERC2-205ENST00000564383 PABPN1Q86U42 306 aaKnown RBP eCLIP12.13□□□□□ -0.47
HERC2-205ENST00000564383 CHADLQ6NUI6 762 aa12.12□□□□□ -0.47
HERC2-205ENST00000564383 CECR2Q9BXF3 1484 aa12.11□□□□□ -0.47
HERC2-205ENST00000564383 RSF1Q96T23 1441 aaPredicted RBP12.07□□□□□ -0.48
HERC2-205ENST00000564383 PRR29P0C7W0 189 aa12.02□□□□□ -0.49
HERC2-205ENST00000564383 MROH2BQ7Z745 1585 aa12.01□□□□□ -0.49
HERC2-205ENST00000564383 POTEIP0CG38 1075 aa12□□□□□ -0.49
HERC2-205ENST00000564383 CD44P16070 742 aaKnown RBP11.95□□□□□ -0.5
HERC2-205ENST00000564383 BAZ1AQ9NRL2 1556 aaPredicted RBP11.95□□□□□ -0.5
HERC2-205ENST00000564383 SMARCA4P51532 1647 aa11.9□□□□□ -0.5
HERC2-205ENST00000564383 CLCN6P51797 869 aa11.89□□□□□ -0.51
HERC2-205ENST00000564383 FARP1Q9Y4F1 1045 aaPredicted RBP11.89□□□□□ -0.51
HERC2-205ENST00000564383 PLSCR2Q9NRY7 297 aa11.87□□□□□ -0.51
HERC2-205ENST00000564383 WIZO95785 1651 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms