RNA–Protein interactions for RNA: ENST00000372004.7

NCOA3-203, Transcript of nuclear receptor coactivator 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA3, Length 7,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA3-203ENST00000372004 NISCHQ9Y2I1 1504 aa10.53□□□□□ -0.72
NCOA3-203ENST00000372004 DCAF8L2P0C7V8 631 aa9.31□□□□□ -0.92
NCOA3-203ENST00000372004 CCDC180Q9P1Z9 1646 aa9.04□□□□□ -0.96
NCOA3-203ENST00000372004 SHROOM4Q9ULL8 1493 aa9.03□□□□□ -0.96
NCOA3-203ENST00000372004 PELP1Q8IZL8 1130 aaKnown RBP8.99□□□□□ -0.97
NCOA3-203ENST00000372004 ZCCHC6Q5VYS8 1495 aaKnown RBP8.92□□□□□ -0.98
NCOA3-203ENST00000372004 MYT1Q01538 1121 aa8.87□□□□□ -0.99
NCOA3-203ENST00000372004 SUPT5HO00267 1087 aaKnown RBP8.85□□□□□ -0.99
NCOA3-203ENST00000372004 ERICH6Q7L0X2 663 aa8.75□□□□□ -1.01
NCOA3-203ENST00000372004 FAM9AQ8IZU1 332 aaPredicted RBP8.67□□□□□ -1.02
NCOA3-203ENST00000372004 MYO15BQ96JP2 1530 aa8.65□□□□□ -1.02
NCOA3-203ENST00000372004 APLP2Q06481 763 aa8.65□□□□□ -1.03
NCOA3-203ENST00000372004 DCAF1Q9Y4B6 1507 aa8.62□□□□□ -1.03
NCOA3-203ENST00000372004 CHIC1Q5VXU3 224 aa8.59□□□□□ -1.03
NCOA3-203ENST00000372004 CCER1Q8TC90 406 aaPredicted RBP8.55□□□□□ -1.04
NCOA3-203ENST00000372004 ABCC9O60706 1549 aa8.48□□□□□ -1.05
NCOA3-203ENST00000372004 SCRIBQ14160 1630 aa8.47□□□□□ -1.05
NCOA3-203ENST00000372004 EHMT2Q96KQ7 1210 aa8.46□□□□□ -1.05
NCOA3-203ENST00000372004 TTBK1Q5TCY1 1321 aaPredicted RBP8.46□□□□□ -1.05
NCOA3-203ENST00000372004 PCGF6Q9BYE7 350 aa8.44□□□□□ -1.06
NCOA3-203ENST00000372004 HRCP23327 699 aa8.44□□□□□ -1.06
NCOA3-203ENST00000372004 CENPBP07199 599 aaPredicted RBP8.42□□□□□ -1.06
NCOA3-203ENST00000372004 LOC105371045A0A1W2PR82 267 aa8.38□□□□□ -1.07
NCOA3-203ENST00000372004 ZEB1P37275 1124 aaPredicted RBP8.36□□□□□ -1.07
NCOA3-203ENST00000372004 RB1CC1Q8TDY2 1594 aa8.35□□□□□ -1.07
NCOA3-203ENST00000372004 RSF1Q96T23 1441 aaPredicted RBP8.32□□□□□ -1.08
NCOA3-203ENST00000372004 YTHDC1Q96MU7 727 aaKnown RBP8.3□□□□□ -1.08
NCOA3-203ENST00000372004 PPARGC1BQ86YN6 1023 aaKnown RBP8.28□□□□□ -1.08
NCOA3-203ENST00000372004 NACADO15069 1562 aa8.27□□□□□ -1.08
NCOA3-203ENST00000372004 WIZO95785 1651 aa8.25□□□□□ -1.09
NCOA3-203ENST00000372004 UNC13AQ9UPW8 1703 aa8.24□□□□□ -1.09
NCOA3-203ENST00000372004 TRIM26Q12899 539 aaPredicted RBP8.24□□□□□ -1.09
NCOA3-203ENST00000372004 TRIM41Q8WV44 630 aa8.24□□□□□ -1.09
NCOA3-203ENST00000372004 ATP1B4Q9UN42 357 aaPredicted RBP8.23□□□□□ -1.09
NCOA3-203ENST00000372004 NEFLP07196 543 aa8.21□□□□□ -1.1
NCOA3-203ENST00000372004 MROH2BQ7Z745 1585 aa8.2□□□□□ -1.1
NCOA3-203ENST00000372004 CECR2Q9BXF3 1484 aa8.19□□□□□ -1.1
NCOA3-203ENST00000372004 UBTFP17480 764 aaKnown RBP8.18□□□□□ -1.1
NCOA3-203ENST00000372004 BAZ1AQ9NRL2 1556 aaPredicted RBP8.17□□□□□ -1.1
NCOA3-203ENST00000372004 RANGAP1P46060 587 aaPredicted RBP8.16□□□□□ -1.1
NCOA3-203ENST00000372004 DAXXQ9UER7 740 aaPredicted RBP8.14□□□□□ -1.11
NCOA3-203ENST00000372004 EIF4G1Q04637 1599 aaKnown RBP8.11□□□□□ -1.11
NCOA3-203ENST00000372004 SMARCA4P51532 1647 aa8.08□□□□□ -1.12
NCOA3-203ENST00000372004 ABCC8Q09428 1581 aa8.05□□□□□ -1.12
NCOA3-203ENST00000372004 TOP2AP11388 1531 aaKnown RBP8.05□□□□□ -1.12
NCOA3-203ENST00000372004 RTL5Q5HYW3 569 aaPredicted RBP8.05□□□□□ -1.12
NCOA3-203ENST00000372004 SMARCA2P51531 1590 aa8.02□□□□□ -1.13
NCOA3-203ENST00000372004 MYT1LQ9UL68 1186 aa8□□□□□ -1.13
NCOA3-203ENST00000372004 CCDC88BA6NC98 1476 aa7.99□□□□□ -1.13
NCOA3-203ENST00000372004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.95□□□□□ -1.14
NCOA3-203ENST00000372004 HNRNPUL2Q1KMD3 747 aaKnown RBP7.95□□□□□ -1.14
NCOA3-203ENST00000372004 ZNF316A6NFI3 1004 aaPredicted RBP7.95□□□□□ -1.14
NCOA3-203ENST00000372004 EIF5BO60841 1220 aaKnown RBP7.94□□□□□ -1.14
NCOA3-203ENST00000372004 BICRAQ9NZM4 1560 aa7.92□□□□□ -1.14
NCOA3-203ENST00000372004 GLIPR1L2Q4G1C9 344 aa7.91□□□□□ -1.14
NCOA3-203ENST00000372004 CEP162Q5TB80 1403 aa7.91□□□□□ -1.14
NCOA3-203ENST00000372004 SOGA1O94964 1423 aa7.91□□□□□ -1.14
NCOA3-203ENST00000372004 WRNQ14191 1432 aaPredicted RBP eCLIP7.89□□□□□ -1.15
NCOA3-203ENST00000372004 POLR3GLQ9BT43 218 aa7.88□□□□□ -1.15
NCOA3-203ENST00000372004 PEG3Q9GZU2 1588 aa7.88□□□□□ -1.15
NCOA3-203ENST00000372004 RUSC2Q8N2Y8 1516 aa7.88□□□□□ -1.15
NCOA3-203ENST00000372004 SYNJ1O43426 1573 aa7.86□□□□□ -1.15
NCOA3-203ENST00000372004 ITGAEP38570 1179 aa7.86□□□□□ -1.15
NCOA3-203ENST00000372004 EEA1Q15075 1411 aa7.86□□□□□ -1.15
NCOA3-203ENST00000372004 PABPN1Q86U42 306 aaKnown RBP eCLIP7.86□□□□□ -1.15
NCOA3-203ENST00000372004 TNIKQ9UKE5 1360 aa7.85□□□□□ -1.15
NCOA3-203ENST00000372004 KIF21BO75037 1637 aa7.84□□□□□ -1.15
NCOA3-203ENST00000372004 GOLGA3Q08378 1498 aa7.84□□□□□ -1.15
NCOA3-203ENST00000372004 SCAF1Q9H7N4 1312 aaKnown RBP7.83□□□□□ -1.16
NCOA3-203ENST00000372004 CSRNP3Q8WYN3 585 aa7.83□□□□□ -1.16
NCOA3-203ENST00000372004 SLC4A1APQ9BWU0 796 aaKnown RBP7.82□□□□□ -1.16
NCOA3-203ENST00000372004 BAZ1BQ9UIG0 1483 aaKnown RBP7.79□□□□□ -1.16
NCOA3-203ENST00000372004 CEP164Q9UPV0 1460 aa7.79□□□□□ -1.16
NCOA3-203ENST00000372004 CLSPNQ9HAW4 1339 aa7.79□□□□□ -1.16
NCOA3-203ENST00000372004 DIEXFQ68CQ4 756 aaKnown RBP7.78□□□□□ -1.16
NCOA3-203ENST00000372004 PRDM2Q13029 1718 aa7.78□□□□□ -1.16
NCOA3-203ENST00000372004 ATAD2BQ9ULI0 1458 aa7.77□□□□□ -1.17
NCOA3-203ENST00000372004 TOP2BQ02880 1626 aa7.76□□□□□ -1.17
NCOA3-203ENST00000372004 BIVM-ERCC5R4GMW8 1640 aa7.76□□□□□ -1.17
NCOA3-203ENST00000372004 CLIP1P30622 1438 aa7.74□□□□□ -1.17
NCOA3-203ENST00000372004 RAPGEF2Q9Y4G8 1499 aa7.74□□□□□ -1.17
NCOA3-203ENST00000372004 ZBTB47Q9UFB7 747 aaPredicted RBP7.73□□□□□ -1.17
NCOA3-203ENST00000372004 FAM50AQ14320 339 aaKnown RBP7.73□□□□□ -1.17
NCOA3-203ENST00000372004 ACIN1Q9UKV3 1341 aaKnown RBP7.72□□□□□ -1.17
NCOA3-203ENST00000372004 NEUROD1Q13562 356 aa7.72□□□□□ -1.17
NCOA3-203ENST00000372004 VPS8Q8N3P4 1428 aa7.71□□□□□ -1.17
NCOA3-203ENST00000372004 GTF3C3Q9Y5Q9 886 aa7.71□□□□□ -1.18
NCOA3-203ENST00000372004 TRIM52Q96A61 297 aa7.71□□□□□ -1.18
NCOA3-203ENST00000372004 CNGB1Q14028 1251 aaPredicted RBP7.7□□□□□ -1.18
NCOA3-203ENST00000372004 BCANQ96GW7 911 aa7.68□□□□□ -1.18
NCOA3-203ENST00000372004 CDK11AQ9UQ88 783 aaPredicted RBP7.68□□□□□ -1.18
NCOA3-203ENST00000372004 ERICH3Q5RHP9 1530 aa7.67□□□□□ -1.18
NCOA3-203ENST00000372004 NEFMP07197 916 aa7.67□□□□□ -1.18
NCOA3-203ENST00000372004 ANP32CO43423 234 aa7.67□□□□□ -1.18
NCOA3-203ENST00000372004 HMGXB3Q12766 1538 aa7.65□□□□□ -1.18
NCOA3-203ENST00000372004 CUX1P39880 1505 aa7.64□□□□□ -1.19
NCOA3-203ENST00000372004 ARAP1Q96P48 1450 aa7.63□□□□□ -1.19
NCOA3-203ENST00000372004 PRXQ9BXM0 1461 aa7.62□□□□□ -1.19
NCOA3-203ENST00000372004 CANXP27824 592 aaKnown RBP7.61□□□□□ -1.19
NCOA3-203ENST00000372004 ANP32BQ92688 251 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms