Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 AC079630.1-202ENST00000618127 1840 ntBASIC23.98■■□□□ 1.43
TWNKQ96RR1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TWNKQ96RR1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TWNKQ96RR1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TWNKQ96RR1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TWNKQ96RR1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TWNKQ96RR1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.98■■□□□ 1.43
TWNKQ96RR1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.98■■□□□ 1.43
TWNKQ96RR1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
TWNKQ96RR1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
TWNKQ96RR1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TWNKQ96RR1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
TWNKQ96RR1 ANOS2P-203ENST00000472227 1816 ntBASIC23.97■■□□□ 1.43
TWNKQ96RR1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
TWNKQ96RR1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.97■■□□□ 1.43
TWNKQ96RR1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
TWNKQ96RR1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TWNKQ96RR1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TWNKQ96RR1 AL136116.3-201ENST00000402907 1138 ntBASIC23.96■■□□□ 1.43
TWNKQ96RR1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
TWNKQ96RR1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.96■■□□□ 1.43
TWNKQ96RR1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
TWNKQ96RR1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
TWNKQ96RR1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.95■■□□□ 1.43
TWNKQ96RR1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.95■■□□□ 1.43
TWNKQ96RR1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TWNKQ96RR1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.95■■□□□ 1.42
TWNKQ96RR1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TWNKQ96RR1 AC008406.3-201ENST00000620001 1374 ntBASIC23.94■■□□□ 1.42
TWNKQ96RR1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
TWNKQ96RR1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TWNKQ96RR1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
TWNKQ96RR1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
TWNKQ96RR1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.94■■□□□ 1.42
TWNKQ96RR1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
TWNKQ96RR1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TWNKQ96RR1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TWNKQ96RR1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TWNKQ96RR1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.93■■□□□ 1.42
TWNKQ96RR1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TWNKQ96RR1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TWNKQ96RR1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
TWNKQ96RR1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.92■■□□□ 1.42
TWNKQ96RR1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TWNKQ96RR1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.92■■□□□ 1.42
TWNKQ96RR1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.92■■□□□ 1.42
TWNKQ96RR1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TWNKQ96RR1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TWNKQ96RR1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.91■■□□□ 1.42
TWNKQ96RR1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.91■■□□□ 1.42
TWNKQ96RR1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TWNKQ96RR1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.91■■□□□ 1.42
TWNKQ96RR1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TWNKQ96RR1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.91■■□□□ 1.42
TWNKQ96RR1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.91■■□□□ 1.42
TWNKQ96RR1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TWNKQ96RR1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TWNKQ96RR1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TWNKQ96RR1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TWNKQ96RR1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.91■■□□□ 1.42
TWNKQ96RR1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
TWNKQ96RR1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TWNKQ96RR1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.91■■□□□ 1.42
TWNKQ96RR1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.9■■□□□ 1.42
TWNKQ96RR1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
TWNKQ96RR1 SRD5A1P1-201ENST00000442297 786 ntBASIC23.9■■□□□ 1.42
TWNKQ96RR1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.9■■□□□ 1.42
TWNKQ96RR1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.9■■□□□ 1.42
TWNKQ96RR1 AC144652.1-201ENST00000609974 1624 ntBASIC23.9■■□□□ 1.42
TWNKQ96RR1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
TWNKQ96RR1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TWNKQ96RR1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TWNKQ96RR1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.9■■□□□ 1.42
TWNKQ96RR1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TWNKQ96RR1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
TWNKQ96RR1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
TWNKQ96RR1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TWNKQ96RR1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.89■■□□□ 1.41
TWNKQ96RR1 AC006455.2-201ENST00000429931 906 ntBASIC23.89■■□□□ 1.41
TWNKQ96RR1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
TWNKQ96RR1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TWNKQ96RR1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TWNKQ96RR1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
TWNKQ96RR1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
TWNKQ96RR1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TWNKQ96RR1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.89■■□□□ 1.41
TWNKQ96RR1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TWNKQ96RR1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.88■■□□□ 1.41
TWNKQ96RR1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
TWNKQ96RR1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
TWNKQ96RR1 AC092068.2-201ENST00000590491 1708 ntBASIC23.88■■□□□ 1.41
TWNKQ96RR1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TWNKQ96RR1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TWNKQ96RR1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TWNKQ96RR1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.88■■□□□ 1.41
TWNKQ96RR1 AC099791.2-201ENST00000605725 427 ntBASIC23.88■■□□□ 1.41
TWNKQ96RR1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TWNKQ96RR1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TWNKQ96RR1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TWNKQ96RR1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms