Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CMC4P56277 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CMC4P56277 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.75■□□□□ 0.27
CMC4P56277 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CMC4P56277 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.75■□□□□ 0.27
CMC4P56277 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMC4P56277 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.74■□□□□ 0.27
CMC4P56277 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CMC4P56277 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMC4P56277 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMC4P56277 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CMC4P56277 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMC4P56277 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CMC4P56277 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMC4P56277 C17orf82-201ENST00000623772 1530 ntBASIC16.74■□□□□ 0.27
CMC4P56277 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.74■□□□□ 0.27
CMC4P56277 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CMC4P56277 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMC4P56277 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CMC4P56277 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CMC4P56277 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMC4P56277 AL136116.3-201ENST00000402907 1138 ntBASIC16.73■□□□□ 0.27
CMC4P56277 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CMC4P56277 AC131281.2-201ENST00000520478 145 ntBASIC16.73■□□□□ 0.27
CMC4P56277 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.73■□□□□ 0.27
CMC4P56277 AL512631.2-201ENST00000604634 923 ntBASIC16.73■□□□□ 0.27
CMC4P56277 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.73■□□□□ 0.27
CMC4P56277 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMC4P56277 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMC4P56277 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMC4P56277 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CMC4P56277 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CMC4P56277 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.72■□□□□ 0.27
CMC4P56277 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CMC4P56277 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.72■□□□□ 0.27
CMC4P56277 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.72■□□□□ 0.27
CMC4P56277 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CMC4P56277 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CMC4P56277 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CMC4P56277 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.72■□□□□ 0.27
CMC4P56277 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CMC4P56277 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CMC4P56277 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.71■□□□□ 0.27
CMC4P56277 AC144652.1-201ENST00000609974 1624 ntBASIC16.71■□□□□ 0.27
CMC4P56277 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.71■□□□□ 0.27
CMC4P56277 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CMC4P56277 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.71■□□□□ 0.27
CMC4P56277 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CMC4P56277 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CMC4P56277 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CMC4P56277 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CMC4P56277 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CMC4P56277 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CMC4P56277 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CMC4P56277 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CMC4P56277 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMC4P56277 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMC4P56277 LINC01529-204ENST00000636474 1715 ntBASIC16.7■□□□□ 0.26
CMC4P56277 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMC4P56277 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.7■□□□□ 0.26
CMC4P56277 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CMC4P56277 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CMC4P56277 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMC4P56277 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
CMC4P56277 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.7■□□□□ 0.26
CMC4P56277 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.7■□□□□ 0.26
CMC4P56277 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.7■□□□□ 0.26
CMC4P56277 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMC4P56277 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMC4P56277 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.7■□□□□ 0.26
CMC4P56277 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.7■□□□□ 0.26
CMC4P56277 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CMC4P56277 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CMC4P56277 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.69■□□□□ 0.26
CMC4P56277 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CMC4P56277 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CMC4P56277 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CMC4P56277 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CMC4P56277 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CMC4P56277 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CMC4P56277 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.69■□□□□ 0.26
CMC4P56277 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.69■□□□□ 0.26
CMC4P56277 DUX4L4-201ENST00000566884 1269 ntBASIC16.69■□□□□ 0.26
CMC4P56277 AL138724.1-201ENST00000606771 1088 ntBASIC16.69■□□□□ 0.26
CMC4P56277 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CMC4P56277 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CMC4P56277 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CMC4P56277 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CMC4P56277 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CMC4P56277 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CMC4P56277 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMC4P56277 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CMC4P56277 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.68■□□□□ 0.26
CMC4P56277 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CMC4P56277 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMC4P56277 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMC4P56277 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CMC4P56277 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMC4P56277 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.68■□□□□ 0.26
CMC4P56277 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms