Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC30.28■■■□□ 2.44
LTN1O94822 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC30.28■■■□□ 2.44
LTN1O94822 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC30.28■■■□□ 2.44
LTN1O94822 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
LTN1O94822 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
LTN1O94822 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
LTN1O94822 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.28■■■□□ 2.44
LTN1O94822 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC30.28■■■□□ 2.44
LTN1O94822 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
LTN1O94822 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC30.27■■■□□ 2.44
LTN1O94822 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
LTN1O94822 MIR572-201ENST00000384983 95 ntBASIC30.27■■■□□ 2.44
LTN1O94822 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
LTN1O94822 AC092437.1-201ENST00000624794 1048 ntBASIC30.27■■■□□ 2.44
LTN1O94822 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC30.27■■■□□ 2.44
LTN1O94822 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
LTN1O94822 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
LTN1O94822 AC022211.4-201ENST00000625094 2161 ntBASIC30.27■■■□□ 2.44
LTN1O94822 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
LTN1O94822 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC30.27■■■□□ 2.44
LTN1O94822 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
LTN1O94822 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC30.26■■■□□ 2.44
LTN1O94822 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC30.26■■■□□ 2.44
LTN1O94822 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC30.26■■■□□ 2.44
LTN1O94822 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
LTN1O94822 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC30.26■■■□□ 2.43
LTN1O94822 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
LTN1O94822 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
LTN1O94822 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
LTN1O94822 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
LTN1O94822 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC30.26■■■□□ 2.43
LTN1O94822 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC30.25■■■□□ 2.43
LTN1O94822 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
LTN1O94822 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.25■■■□□ 2.43
LTN1O94822 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
LTN1O94822 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
LTN1O94822 AC133637.1-201ENST00000624115 1537 ntBASIC30.25■■■□□ 2.43
LTN1O94822 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC30.25■■■□□ 2.43
LTN1O94822 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
LTN1O94822 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
LTN1O94822 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC30.24■■■□□ 2.43
LTN1O94822 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
LTN1O94822 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC30.24■■■□□ 2.43
LTN1O94822 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC30.24■■■□□ 2.43
LTN1O94822 AL358852.1-201ENST00000623174 1268 ntBASIC30.24■■■□□ 2.43
LTN1O94822 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC30.24■■■□□ 2.43
LTN1O94822 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC30.24■■■□□ 2.43
LTN1O94822 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
LTN1O94822 OR2I1P-207ENST00000453522 948 ntBASIC30.23■■■□□ 2.43
LTN1O94822 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
LTN1O94822 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
LTN1O94822 AP003733.4-201ENST00000623785 1697 ntBASIC30.23■■■□□ 2.43
LTN1O94822 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
LTN1O94822 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
LTN1O94822 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
LTN1O94822 AL499627.2-201ENST00000606283 725 ntBASIC30.23■■■□□ 2.43
LTN1O94822 MIR6084-201ENST00000622012 110 ntBASIC30.23■■■□□ 2.43
LTN1O94822 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
LTN1O94822 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
LTN1O94822 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC30.22■■■□□ 2.43
LTN1O94822 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC30.22■■■□□ 2.43
LTN1O94822 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC30.22■■■□□ 2.43
LTN1O94822 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
LTN1O94822 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC30.21■■■□□ 2.43
LTN1O94822 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC30.21■■■□□ 2.43
LTN1O94822 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC30.21■■■□□ 2.43
LTN1O94822 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
LTN1O94822 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC30.2■■■□□ 2.43
LTN1O94822 GLI3-203ENST00000437480 451 ntTSL 2 BASIC30.2■■■□□ 2.43
LTN1O94822 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
LTN1O94822 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC30.2■■■□□ 2.43
LTN1O94822 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
LTN1O94822 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
LTN1O94822 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
LTN1O94822 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
LTN1O94822 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC30.2■■■□□ 2.42
LTN1O94822 KRT18P14-201ENST00000534205 1250 ntBASIC30.2■■■□□ 2.42
LTN1O94822 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC30.2■■■□□ 2.42
LTN1O94822 AL354811.1-201ENST00000610286 706 ntBASIC30.19■■■□□ 2.42
LTN1O94822 RARRES2P11-201ENST00000635158 484 ntBASIC30.19■■■□□ 2.42
LTN1O94822 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
LTN1O94822 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
LTN1O94822 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
LTN1O94822 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC30.18■■■□□ 2.42
LTN1O94822 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
LTN1O94822 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
LTN1O94822 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
LTN1O94822 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC30.18■■■□□ 2.42
LTN1O94822 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
LTN1O94822 AC123595.1-201ENST00000440769 1046 ntBASIC30.18■■■□□ 2.42
LTN1O94822 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
LTN1O94822 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC30.18■■■□□ 2.42
LTN1O94822 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
LTN1O94822 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
LTN1O94822 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
LTN1O94822 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC30.18■■■□□ 2.42
LTN1O94822 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
LTN1O94822 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC30.18■■■□□ 2.42
LTN1O94822 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC30.18■■■□□ 2.42
LTN1O94822 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms