Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH20Q9HBT6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH20Q9HBT6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH20Q9HBT6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH20Q9HBT6 AC131212.1-201ENST00000613771 668 ntBASIC19.67■□□□□ 0.74
CDH20Q9HBT6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH20Q9HBT6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH20Q9HBT6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH20Q9HBT6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH20Q9HBT6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH20Q9HBT6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH20Q9HBT6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CDH20Q9HBT6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH20Q9HBT6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH20Q9HBT6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH20Q9HBT6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH20Q9HBT6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH20Q9HBT6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH20Q9HBT6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH20Q9HBT6 AL117332.1-201ENST00000622628 974 ntBASIC19.66■□□□□ 0.74
CDH20Q9HBT6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH20Q9HBT6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH20Q9HBT6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CDH20Q9HBT6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH20Q9HBT6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH20Q9HBT6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH20Q9HBT6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH20Q9HBT6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH20Q9HBT6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.65■□□□□ 0.74
CDH20Q9HBT6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH20Q9HBT6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH20Q9HBT6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH20Q9HBT6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
CDH20Q9HBT6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH20Q9HBT6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CDH20Q9HBT6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CDH20Q9HBT6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH20Q9HBT6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH20Q9HBT6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.64■□□□□ 0.73
CDH20Q9HBT6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH20Q9HBT6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CDH20Q9HBT6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CDH20Q9HBT6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH20Q9HBT6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH20Q9HBT6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH20Q9HBT6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH20Q9HBT6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH20Q9HBT6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH20Q9HBT6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH20Q9HBT6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH20Q9HBT6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CDH20Q9HBT6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH20Q9HBT6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH20Q9HBT6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH20Q9HBT6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.63■□□□□ 0.73
CDH20Q9HBT6 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.63■□□□□ 0.73
CDH20Q9HBT6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.63■□□□□ 0.73
CDH20Q9HBT6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH20Q9HBT6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH20Q9HBT6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH20Q9HBT6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH20Q9HBT6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH20Q9HBT6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDH20Q9HBT6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH20Q9HBT6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH20Q9HBT6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH20Q9HBT6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH20Q9HBT6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH20Q9HBT6 MIR3621-201ENST00000580529 85 ntBASIC19.62■□□□□ 0.73
CDH20Q9HBT6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH20Q9HBT6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH20Q9HBT6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH20Q9HBT6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH20Q9HBT6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CDH20Q9HBT6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH20Q9HBT6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH20Q9HBT6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH20Q9HBT6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH20Q9HBT6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH20Q9HBT6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH20Q9HBT6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH20Q9HBT6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH20Q9HBT6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH20Q9HBT6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH20Q9HBT6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH20Q9HBT6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH20Q9HBT6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH20Q9HBT6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.6■□□□□ 0.73
CDH20Q9HBT6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH20Q9HBT6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH20Q9HBT6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH20Q9HBT6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH20Q9HBT6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH20Q9HBT6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH20Q9HBT6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.59■□□□□ 0.73
CDH20Q9HBT6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.59■□□□□ 0.73
CDH20Q9HBT6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH20Q9HBT6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH20Q9HBT6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH20Q9HBT6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms