Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.47■□□□□ 0.87
SNRNP40Q96DI7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNRNP40Q96DI7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNRNP40Q96DI7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNRNP40Q96DI7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
SNRNP40Q96DI7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNRNP40Q96DI7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNRNP40Q96DI7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNRNP40Q96DI7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.46■□□□□ 0.87
SNRNP40Q96DI7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.46■□□□□ 0.87
SNRNP40Q96DI7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SNRNP40Q96DI7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNRNP40Q96DI7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SNRNP40Q96DI7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SNRNP40Q96DI7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SNRNP40Q96DI7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNRNP40Q96DI7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRNP40Q96DI7 AC027612.3-201ENST00000413684 1047 ntBASIC20.45■□□□□ 0.86
SNRNP40Q96DI7 AC123595.1-201ENST00000440769 1046 ntBASIC20.45■□□□□ 0.86
SNRNP40Q96DI7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNRNP40Q96DI7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SNRNP40Q96DI7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.45■□□□□ 0.86
SNRNP40Q96DI7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.45■□□□□ 0.86
SNRNP40Q96DI7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
SNRNP40Q96DI7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRNP40Q96DI7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNRNP40Q96DI7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNRNP40Q96DI7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.44■□□□□ 0.86
SNRNP40Q96DI7 AC004911.1-201ENST00000416316 871 ntBASIC20.44■□□□□ 0.86
SNRNP40Q96DI7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNRNP40Q96DI7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.44■□□□□ 0.86
SNRNP40Q96DI7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.44■□□□□ 0.86
SNRNP40Q96DI7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.44■□□□□ 0.86
SNRNP40Q96DI7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.44■□□□□ 0.86
SNRNP40Q96DI7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNRNP40Q96DI7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRNP40Q96DI7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.44■□□□□ 0.86
SNRNP40Q96DI7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SNRNP40Q96DI7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.43■□□□□ 0.86
SNRNP40Q96DI7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNRNP40Q96DI7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.43■□□□□ 0.86
SNRNP40Q96DI7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.43■□□□□ 0.86
SNRNP40Q96DI7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SNRNP40Q96DI7 MIR6084-201ENST00000622012 110 ntBASIC20.43■□□□□ 0.86
SNRNP40Q96DI7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.43■□□□□ 0.86
SNRNP40Q96DI7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNRNP40Q96DI7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.43■□□□□ 0.86
SNRNP40Q96DI7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNRNP40Q96DI7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRNP40Q96DI7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.42■□□□□ 0.86
SNRNP40Q96DI7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.42■□□□□ 0.86
SNRNP40Q96DI7 MIR572-201ENST00000384983 95 ntBASIC20.42■□□□□ 0.86
SNRNP40Q96DI7 IGHV3-19-201ENST00000521488 291 ntBASIC20.42■□□□□ 0.86
SNRNP40Q96DI7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.42■□□□□ 0.86
SNRNP40Q96DI7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNRNP40Q96DI7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
SNRNP40Q96DI7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRNP40Q96DI7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRNP40Q96DI7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.42■□□□□ 0.86
SNRNP40Q96DI7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRNP40Q96DI7 AC141586.4-201ENST00000624558 1573 ntBASIC20.42■□□□□ 0.86
SNRNP40Q96DI7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.41■□□□□ 0.86
SNRNP40Q96DI7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRNP40Q96DI7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.41■□□□□ 0.86
SNRNP40Q96DI7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.41■□□□□ 0.86
SNRNP40Q96DI7 AL161729.1-201ENST00000604104 1402 ntBASIC20.41■□□□□ 0.86
SNRNP40Q96DI7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNRNP40Q96DI7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
SNRNP40Q96DI7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.41■□□□□ 0.86
SNRNP40Q96DI7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNRNP40Q96DI7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRNP40Q96DI7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
SNRNP40Q96DI7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRNP40Q96DI7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRNP40Q96DI7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.41■□□□□ 0.86
SNRNP40Q96DI7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNRNP40Q96DI7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.4■□□□□ 0.86
SNRNP40Q96DI7 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.4■□□□□ 0.86
SNRNP40Q96DI7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNRNP40Q96DI7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.4■□□□□ 0.86
SNRNP40Q96DI7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.4■□□□□ 0.86
SNRNP40Q96DI7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.4■□□□□ 0.86
SNRNP40Q96DI7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.4■□□□□ 0.86
SNRNP40Q96DI7 AC012414.1-201ENST00000556676 535 ntBASIC20.4■□□□□ 0.86
SNRNP40Q96DI7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.4■□□□□ 0.86
SNRNP40Q96DI7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNRNP40Q96DI7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNRNP40Q96DI7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.86
SNRNP40Q96DI7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SNRNP40Q96DI7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNRNP40Q96DI7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.39■□□□□ 0.86
SNRNP40Q96DI7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SNRNP40Q96DI7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNRNP40Q96DI7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.39■□□□□ 0.85
SNRNP40Q96DI7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.39■□□□□ 0.85
SNRNP40Q96DI7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.39■□□□□ 0.85
SNRNP40Q96DI7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.39■□□□□ 0.85
SNRNP40Q96DI7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNRNP40Q96DI7 AL354811.1-201ENST00000610286 706 ntBASIC20.39■□□□□ 0.85
SNRNP40Q96DI7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms