Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
LTBP4Q8N2S1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
LTBP4Q8N2S1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
LTBP4Q8N2S1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC32.26■■■□□ 2.75
LTBP4Q8N2S1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC32.26■■■□□ 2.75
LTBP4Q8N2S1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC32.26■■■□□ 2.75
LTBP4Q8N2S1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC32.26■■■□□ 2.75
LTBP4Q8N2S1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC32.25■■■□□ 2.75
LTBP4Q8N2S1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
LTBP4Q8N2S1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC32.24■■■□□ 2.75
LTBP4Q8N2S1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
LTBP4Q8N2S1 AL121832.2-201ENST00000610979 668 ntBASIC32.24■■■□□ 2.75
LTBP4Q8N2S1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
LTBP4Q8N2S1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
LTBP4Q8N2S1 RPS2P52-201ENST00000469610 820 ntBASIC32.23■■■□□ 2.75
LTBP4Q8N2S1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC32.23■■■□□ 2.75
LTBP4Q8N2S1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC32.23■■■□□ 2.75
LTBP4Q8N2S1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
LTBP4Q8N2S1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
LTBP4Q8N2S1 AC011767.1-201ENST00000617410 1153 ntBASIC32.22■■■□□ 2.75
LTBP4Q8N2S1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC32.22■■■□□ 2.75
LTBP4Q8N2S1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
LTBP4Q8N2S1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC32.22■■■□□ 2.75
LTBP4Q8N2S1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC32.22■■■□□ 2.75
LTBP4Q8N2S1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC32.22■■■□□ 2.75
LTBP4Q8N2S1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC32.22■■■□□ 2.75
LTBP4Q8N2S1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
LTBP4Q8N2S1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC32.21■■■□□ 2.75
LTBP4Q8N2S1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
LTBP4Q8N2S1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC32.2■■■□□ 2.75
LTBP4Q8N2S1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC32.2■■■□□ 2.75
LTBP4Q8N2S1 PRORSD1P-201ENST00000295112 541 ntBASIC32.2■■■□□ 2.75
LTBP4Q8N2S1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC32.2■■■□□ 2.75
LTBP4Q8N2S1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC32.2■■■□□ 2.75
LTBP4Q8N2S1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC32.2■■■□□ 2.75
LTBP4Q8N2S1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC32.2■■■□□ 2.74
LTBP4Q8N2S1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC32.2■■■□□ 2.74
LTBP4Q8N2S1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.74
LTBP4Q8N2S1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.74
LTBP4Q8N2S1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
LTBP4Q8N2S1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
LTBP4Q8N2S1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC32.19■■■□□ 2.74
LTBP4Q8N2S1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC32.19■■■□□ 2.74
LTBP4Q8N2S1 POU5F1P3-201ENST00000428824 1078 ntBASIC32.19■■■□□ 2.74
LTBP4Q8N2S1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC32.19■■■□□ 2.74
LTBP4Q8N2S1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC32.19■■■□□ 2.74
LTBP4Q8N2S1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC32.19■■■□□ 2.74
LTBP4Q8N2S1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC32.19■■■□□ 2.74
LTBP4Q8N2S1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
LTBP4Q8N2S1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
LTBP4Q8N2S1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
LTBP4Q8N2S1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
LTBP4Q8N2S1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC32.18■■■□□ 2.74
LTBP4Q8N2S1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC32.18■■■□□ 2.74
LTBP4Q8N2S1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
LTBP4Q8N2S1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC32.18■■■□□ 2.74
LTBP4Q8N2S1 AC091060.1-201ENST00000623524 1766 ntBASIC32.18■■■□□ 2.74
LTBP4Q8N2S1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC32.17■■■□□ 2.74
LTBP4Q8N2S1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
LTBP4Q8N2S1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
LTBP4Q8N2S1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
LTBP4Q8N2S1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
LTBP4Q8N2S1 COX20-201ENST00000366528 568 ntTSL 2 BASIC32.17■■■□□ 2.74
LTBP4Q8N2S1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC32.17■■■□□ 2.74
LTBP4Q8N2S1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC32.16■■■□□ 2.74
LTBP4Q8N2S1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
LTBP4Q8N2S1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC32.16■■■□□ 2.74
LTBP4Q8N2S1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
LTBP4Q8N2S1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
LTBP4Q8N2S1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
LTBP4Q8N2S1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
LTBP4Q8N2S1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC32.15■■■□□ 2.74
LTBP4Q8N2S1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
LTBP4Q8N2S1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
LTBP4Q8N2S1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC32.15■■■□□ 2.74
LTBP4Q8N2S1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
LTBP4Q8N2S1 AC098590.1-201ENST00000468126 897 ntBASIC32.15■■■□□ 2.74
LTBP4Q8N2S1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC32.15■■■□□ 2.74
LTBP4Q8N2S1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.74
LTBP4Q8N2S1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC32.14■■■□□ 2.74
LTBP4Q8N2S1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
LTBP4Q8N2S1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
LTBP4Q8N2S1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
LTBP4Q8N2S1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC32.14■■■□□ 2.74
LTBP4Q8N2S1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
LTBP4Q8N2S1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
LTBP4Q8N2S1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
LTBP4Q8N2S1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC32.13■■■□□ 2.73
LTBP4Q8N2S1 AP004609.3-201ENST00000610705 1884 ntBASIC32.13■■■□□ 2.73
LTBP4Q8N2S1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC32.13■■■□□ 2.73
LTBP4Q8N2S1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
LTBP4Q8N2S1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
LTBP4Q8N2S1 AC083906.2-201ENST00000511578 360 ntBASIC32.12■■■□□ 2.73
LTBP4Q8N2S1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC32.12■■■□□ 2.73
LTBP4Q8N2S1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
LTBP4Q8N2S1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
LTBP4Q8N2S1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
LTBP4Q8N2S1 AC098934.4-201ENST00000564127 592 ntBASIC32.11■■■□□ 2.73
LTBP4Q8N2S1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
LTBP4Q8N2S1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms