Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT4O95628 AC096631.2-201ENST00000436136 790 ntBASIC19.99■□□□□ 0.79
CNOT4O95628 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT4O95628 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.99■□□□□ 0.79
CNOT4O95628 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT4O95628 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT4O95628 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CNOT4O95628 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT4O95628 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.98■□□□□ 0.79
CNOT4O95628 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT4O95628 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT4O95628 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.98■□□□□ 0.79
CNOT4O95628 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.98■□□□□ 0.79
CNOT4O95628 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT4O95628 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.98■□□□□ 0.79
CNOT4O95628 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT4O95628 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.98■□□□□ 0.79
CNOT4O95628 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT4O95628 AC092171.4-201ENST00000609130 632 ntBASIC19.98■□□□□ 0.79
CNOT4O95628 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT4O95628 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT4O95628 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNOT4O95628 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CNOT4O95628 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNOT4O95628 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CNOT4O95628 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT4O95628 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT4O95628 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.96■□□□□ 0.79
CNOT4O95628 LINC01124-201ENST00000409786 2117 ntBASIC19.96■□□□□ 0.79
CNOT4O95628 AC009102.2-201ENST00000606772 1639 ntBASIC19.96■□□□□ 0.79
CNOT4O95628 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT4O95628 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT4O95628 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CNOT4O95628 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CNOT4O95628 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT4O95628 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT4O95628 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT4O95628 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT4O95628 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT4O95628 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT4O95628 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.95■□□□□ 0.78
CNOT4O95628 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.95■□□□□ 0.78
CNOT4O95628 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.95■□□□□ 0.78
CNOT4O95628 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT4O95628 DUX4L19-201ENST00000557448 1267 ntBASIC19.95■□□□□ 0.78
CNOT4O95628 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CNOT4O95628 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT4O95628 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT4O95628 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT4O95628 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.95■□□□□ 0.78
CNOT4O95628 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT4O95628 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CNOT4O95628 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CNOT4O95628 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT4O95628 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.94■□□□□ 0.78
CNOT4O95628 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.94■□□□□ 0.78
CNOT4O95628 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.94■□□□□ 0.78
CNOT4O95628 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT4O95628 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT4O95628 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.94■□□□□ 0.78
CNOT4O95628 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.94■□□□□ 0.78
CNOT4O95628 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CNOT4O95628 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.93■□□□□ 0.78
CNOT4O95628 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT4O95628 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT4O95628 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.93■□□□□ 0.78
CNOT4O95628 C17orf82-201ENST00000623772 1530 ntBASIC19.93■□□□□ 0.78
CNOT4O95628 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.93■□□□□ 0.78
CNOT4O95628 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT4O95628 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT4O95628 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.93■□□□□ 0.78
CNOT4O95628 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.93■□□□□ 0.78
CNOT4O95628 AC241377.3-202ENST00000626088 1088 ntBASIC19.93■□□□□ 0.78
CNOT4O95628 AC241585.3-202ENST00000628937 1088 ntBASIC19.93■□□□□ 0.78
CNOT4O95628 AC245100.8-202ENST00000629247 1058 ntBASIC19.93■□□□□ 0.78
CNOT4O95628 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.93■□□□□ 0.78
CNOT4O95628 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT4O95628 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT4O95628 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT4O95628 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT4O95628 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT4O95628 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT4O95628 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT4O95628 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT4O95628 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.92■□□□□ 0.78
CNOT4O95628 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.92■□□□□ 0.78
CNOT4O95628 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT4O95628 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.92■□□□□ 0.78
CNOT4O95628 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.92■□□□□ 0.78
CNOT4O95628 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.92■□□□□ 0.78
CNOT4O95628 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CNOT4O95628 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT4O95628 AC133561.4-201ENST00000566112 224 ntBASIC19.91■□□□□ 0.78
CNOT4O95628 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.91■□□□□ 0.78
CNOT4O95628 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT4O95628 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.91■□□□□ 0.78
CNOT4O95628 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.91■□□□□ 0.78
CNOT4O95628 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT4O95628 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT4O95628 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms