Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.46■□□□□ 0.55
SAA2-SAA4A0A096LPE2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.46■□□□□ 0.55
SAA2-SAA4A0A096LPE2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.46■□□□□ 0.55
SAA2-SAA4A0A096LPE2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.46■□□□□ 0.55
SAA2-SAA4A0A096LPE2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
SAA2-SAA4A0A096LPE2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SAA2-SAA4A0A096LPE2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SAA2-SAA4A0A096LPE2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SAA2-SAA4A0A096LPE2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.44■□□□□ 0.54
SAA2-SAA4A0A096LPE2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.44■□□□□ 0.54
SAA2-SAA4A0A096LPE2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SAA2-SAA4A0A096LPE2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
SAA2-SAA4A0A096LPE2 DUSP8P3-201ENST00000399571 1760 ntBASIC18.44■□□□□ 0.54
SAA2-SAA4A0A096LPE2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
SAA2-SAA4A0A096LPE2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SAA2-SAA4A0A096LPE2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
SAA2-SAA4A0A096LPE2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SAA2-SAA4A0A096LPE2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SAA2-SAA4A0A096LPE2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SAA2-SAA4A0A096LPE2 BX664725.1-201ENST00000438252 379 ntBASIC18.43■□□□□ 0.54
SAA2-SAA4A0A096LPE2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SAA2-SAA4A0A096LPE2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.43■□□□□ 0.54
SAA2-SAA4A0A096LPE2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.43■□□□□ 0.54
SAA2-SAA4A0A096LPE2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SAA2-SAA4A0A096LPE2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SAA2-SAA4A0A096LPE2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.43■□□□□ 0.54
SAA2-SAA4A0A096LPE2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.42■□□□□ 0.54
SAA2-SAA4A0A096LPE2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SAA2-SAA4A0A096LPE2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.42■□□□□ 0.54
SAA2-SAA4A0A096LPE2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.42■□□□□ 0.54
SAA2-SAA4A0A096LPE2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SAA2-SAA4A0A096LPE2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SAA2-SAA4A0A096LPE2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SAA2-SAA4A0A096LPE2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SAA2-SAA4A0A096LPE2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.42■□□□□ 0.54
SAA2-SAA4A0A096LPE2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SAA2-SAA4A0A096LPE2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.42■□□□□ 0.54
SAA2-SAA4A0A096LPE2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SAA2-SAA4A0A096LPE2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SAA2-SAA4A0A096LPE2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SAA2-SAA4A0A096LPE2 AC021242.3-201ENST00000607598 1377 ntBASIC18.42■□□□□ 0.54
SAA2-SAA4A0A096LPE2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.41■□□□□ 0.54
SAA2-SAA4A0A096LPE2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SAA2-SAA4A0A096LPE2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SAA2-SAA4A0A096LPE2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SAA2-SAA4A0A096LPE2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SAA2-SAA4A0A096LPE2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SAA2-SAA4A0A096LPE2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SAA2-SAA4A0A096LPE2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
SAA2-SAA4A0A096LPE2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SAA2-SAA4A0A096LPE2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SAA2-SAA4A0A096LPE2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SAA2-SAA4A0A096LPE2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SAA2-SAA4A0A096LPE2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.41■□□□□ 0.54
SAA2-SAA4A0A096LPE2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SAA2-SAA4A0A096LPE2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SAA2-SAA4A0A096LPE2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.4■□□□□ 0.54
SAA2-SAA4A0A096LPE2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SAA2-SAA4A0A096LPE2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SAA2-SAA4A0A096LPE2 RARRES2P1-201ENST00000474487 481 ntBASIC18.4■□□□□ 0.54
SAA2-SAA4A0A096LPE2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.4■□□□□ 0.54
SAA2-SAA4A0A096LPE2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.4■□□□□ 0.54
SAA2-SAA4A0A096LPE2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
SAA2-SAA4A0A096LPE2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SAA2-SAA4A0A096LPE2 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.4■□□□□ 0.54
SAA2-SAA4A0A096LPE2 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.4■□□□□ 0.54
SAA2-SAA4A0A096LPE2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SAA2-SAA4A0A096LPE2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SAA2-SAA4A0A096LPE2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SAA2-SAA4A0A096LPE2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SAA2-SAA4A0A096LPE2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SAA2-SAA4A0A096LPE2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.4■□□□□ 0.54
SAA2-SAA4A0A096LPE2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.39■□□□□ 0.54
SAA2-SAA4A0A096LPE2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.39■□□□□ 0.53
SAA2-SAA4A0A096LPE2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SAA2-SAA4A0A096LPE2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SAA2-SAA4A0A096LPE2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SAA2-SAA4A0A096LPE2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SAA2-SAA4A0A096LPE2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SAA2-SAA4A0A096LPE2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.39■□□□□ 0.53
SAA2-SAA4A0A096LPE2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SAA2-SAA4A0A096LPE2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SAA2-SAA4A0A096LPE2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SAA2-SAA4A0A096LPE2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms