Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF6Q9Y252 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
RNF6Q9Y252 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF6Q9Y252 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF6Q9Y252 UNC93B8-201ENST00000511903 705 ntBASIC21.24■□□□□ 0.99
RNF6Q9Y252 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF6Q9Y252 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF6Q9Y252 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF6Q9Y252 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF6Q9Y252 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF6Q9Y252 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF6Q9Y252 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF6Q9Y252 HLA-L-211ENST00000482052 1765 ntBASIC21.23■□□□□ 0.99
RNF6Q9Y252 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RNF6Q9Y252 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF6Q9Y252 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF6Q9Y252 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF6Q9Y252 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF6Q9Y252 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF6Q9Y252 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF6Q9Y252 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF6Q9Y252 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RNF6Q9Y252 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF6Q9Y252 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF6Q9Y252 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF6Q9Y252 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF6Q9Y252 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF6Q9Y252 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF6Q9Y252 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF6Q9Y252 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.22■□□□□ 0.99
RNF6Q9Y252 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF6Q9Y252 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF6Q9Y252 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF6Q9Y252 KRT16P3-201ENST00000439127 1283 ntBASIC21.22■□□□□ 0.99
RNF6Q9Y252 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.22■□□□□ 0.99
RNF6Q9Y252 AC120024.1-201ENST00000562672 995 ntBASIC21.22■□□□□ 0.99
RNF6Q9Y252 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF6Q9Y252 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF6Q9Y252 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
RNF6Q9Y252 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF6Q9Y252 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.21■□□□□ 0.99
RNF6Q9Y252 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF6Q9Y252 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF6Q9Y252 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF6Q9Y252 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF6Q9Y252 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF6Q9Y252 AC137630.3-201ENST00000607245 391 ntBASIC21.21■□□□□ 0.99
RNF6Q9Y252 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF6Q9Y252 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF6Q9Y252 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF6Q9Y252 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF6Q9Y252 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RNF6Q9Y252 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF6Q9Y252 AL117328.2-201ENST00000624617 1940 ntBASIC21.2■□□□□ 0.98
RNF6Q9Y252 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF6Q9Y252 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF6Q9Y252 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF6Q9Y252 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF6Q9Y252 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.2■□□□□ 0.98
RNF6Q9Y252 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.2■□□□□ 0.98
RNF6Q9Y252 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.2■□□□□ 0.98
RNF6Q9Y252 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF6Q9Y252 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF6Q9Y252 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF6Q9Y252 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF6Q9Y252 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF6Q9Y252 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RNF6Q9Y252 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF6Q9Y252 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF6Q9Y252 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF6Q9Y252 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF6Q9Y252 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF6Q9Y252 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF6Q9Y252 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RNF6Q9Y252 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RNF6Q9Y252 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RNF6Q9Y252 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF6Q9Y252 TSPY9P-201ENST00000440215 945 ntBASIC21.18■□□□□ 0.98
RNF6Q9Y252 TSPY11P-201ENST00000442607 1045 ntBASIC21.18■□□□□ 0.98
RNF6Q9Y252 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF6Q9Y252 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF6Q9Y252 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF6Q9Y252 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF6Q9Y252 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF6Q9Y252 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF6Q9Y252 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF6Q9Y252 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF6Q9Y252 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF6Q9Y252 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF6Q9Y252 AC021242.3-201ENST00000607598 1377 ntBASIC21.17■□□□□ 0.98
RNF6Q9Y252 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF6Q9Y252 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RNF6Q9Y252 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF6Q9Y252 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF6Q9Y252 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF6Q9Y252 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF6Q9Y252 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RNF6Q9Y252 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF6Q9Y252 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RNF6Q9Y252 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms