Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
UBE2E2Q96LR5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBE2E2Q96LR5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.58■□□□□ 0.41
UBE2E2Q96LR5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.58■□□□□ 0.4
UBE2E2Q96LR5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.58■□□□□ 0.4
UBE2E2Q96LR5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.58■□□□□ 0.4
UBE2E2Q96LR5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.58■□□□□ 0.4
UBE2E2Q96LR5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
UBE2E2Q96LR5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
UBE2E2Q96LR5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E2Q96LR5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E2Q96LR5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
UBE2E2Q96LR5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E2Q96LR5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E2Q96LR5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
UBE2E2Q96LR5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
UBE2E2Q96LR5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.57■□□□□ 0.4
UBE2E2Q96LR5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.57■□□□□ 0.4
UBE2E2Q96LR5 AC092171.4-201ENST00000609130 632 ntBASIC17.57■□□□□ 0.4
UBE2E2Q96LR5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E2Q96LR5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E2Q96LR5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E2Q96LR5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.57■□□□□ 0.4
UBE2E2Q96LR5 AC009102.2-201ENST00000606772 1639 ntBASIC17.57■□□□□ 0.4
UBE2E2Q96LR5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
UBE2E2Q96LR5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
UBE2E2Q96LR5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E2Q96LR5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE2E2Q96LR5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
UBE2E2Q96LR5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
UBE2E2Q96LR5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UBE2E2Q96LR5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
UBE2E2Q96LR5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
UBE2E2Q96LR5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2E2Q96LR5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE2E2Q96LR5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
UBE2E2Q96LR5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.55■□□□□ 0.4
UBE2E2Q96LR5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE2E2Q96LR5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
UBE2E2Q96LR5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UBE2E2Q96LR5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.54■□□□□ 0.4
UBE2E2Q96LR5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E2Q96LR5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E2Q96LR5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E2Q96LR5 DUX4L19-201ENST00000557448 1267 ntBASIC17.54■□□□□ 0.4
UBE2E2Q96LR5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.54■□□□□ 0.4
UBE2E2Q96LR5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E2Q96LR5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.53■□□□□ 0.4
UBE2E2Q96LR5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.53■□□□□ 0.4
UBE2E2Q96LR5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.53■□□□□ 0.4
UBE2E2Q96LR5 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.53■□□□□ 0.4
UBE2E2Q96LR5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E2Q96LR5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E2Q96LR5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2E2Q96LR5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.52■□□□□ 0.4
UBE2E2Q96LR5 C17orf82-201ENST00000623772 1530 ntBASIC17.52■□□□□ 0.4
UBE2E2Q96LR5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2E2Q96LR5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2E2Q96LR5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.52■□□□□ 0.4
UBE2E2Q96LR5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2E2Q96LR5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2E2Q96LR5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.52■□□□□ 0.4
UBE2E2Q96LR5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.52■□□□□ 0.4
UBE2E2Q96LR5 AL139246.5-201ENST00000606645 996 ntBASIC17.52■□□□□ 0.4
UBE2E2Q96LR5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
UBE2E2Q96LR5 AC241377.3-202ENST00000626088 1088 ntBASIC17.52■□□□□ 0.4
UBE2E2Q96LR5 AC241585.3-202ENST00000628937 1088 ntBASIC17.52■□□□□ 0.4
UBE2E2Q96LR5 AC245100.8-202ENST00000629247 1058 ntBASIC17.52■□□□□ 0.4
UBE2E2Q96LR5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2E2Q96LR5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
UBE2E2Q96LR5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E2Q96LR5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E2Q96LR5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E2Q96LR5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E2Q96LR5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.51■□□□□ 0.39
UBE2E2Q96LR5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.51■□□□□ 0.39
UBE2E2Q96LR5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
UBE2E2Q96LR5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.51■□□□□ 0.39
UBE2E2Q96LR5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E2Q96LR5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E2Q96LR5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms